Azorhizobium caulinodans: AZC_3107
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Entry
AZC_3107 CDS
T00609
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
azc
Azorhizobium caulinodans
Brite
KEGG Orthology (KO) [BR:
azc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
azc03009
]
AZC_3107
Enzymes [BR:
azc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AZC_3107
Ribosome biogenesis [BR:
azc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AZC_3107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_31
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_25
DUF6628
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BAF89105
UniProt:
A8IBR2
LinkDB
All DBs
Position
complement(3558748..3559968)
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AA seq
406 aa
AA seq
DB search
MSEMEVEVLRVGAQGDGLAAGGLFVPYGLPGEIIAGRRDKDRLVEPRVLKASPERVAPAC
THFGLCGGCLLQHWEAAAYQAWKRGLVVDAVSRERVEVEVAPLVDAHGEGRRRAIFHARQ
LGRRTVVGFAERKSHAMVPVTECPVLSPALDQALPVARAVAEALAEMKKPLDLHVTATES
GLDLDVRGSGPLSPMILMDLAALADRFDLARLTRHGEMVVQRRLPFLPMGLARVELPPAS
FLQATAAGEALLAQAVGEGVEGARSVADLFCGVGTFALRLASHARVRGYESNETAITALL
KAIRGTQGLKSVEGEVRDLFRRPLMAQELEKFEAVVIDPPRQGAEAQARELARSKVERLV
YVSCSAQTFARDARLLIDGGFRLERVTPYDQFRYSPHVELVGHFHR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagatggaagtggaagtcctgcgcgtcggcgcgcagggagatgggctcgcggcc
ggcggcctgttcgtgccttatggcctgccgggggagatcatcgccggccggcgcgacaag
gaccggctggtggagccccgcgtcctcaaggcgagcccggagcgggtggcccccgcctgc
acgcatttcggcctctgcggcggctgcctgctccagcattgggaggcagcggcctatcag
gcgtggaagcgcggcctggtggtggacgcggtctcccgcgaacgggtcgaggtggaggtg
gcgccgctggtggatgcccatggcgagggccgccgccgcgccatcttccatgcccggcaa
ctgggcaggcgcaccgtggtcggctttgccgagcgcaagtcgcacgccatggtgccggtc
acggaatgcccggtgctctcccccgccctcgatcaggcccttcccgtggcgcgggcggtg
gccgaagcattggcggagatgaagaagcccctcgacctgcatgtgaccgccaccgagagc
gggcttgatctggacgtgcgcggctcgggcccgctctcgcccatgatcctcatggacctc
gccgccctcgcggatcgcttcgatcttgcccgtctcacccgccacggcgagatggtggtg
cagcgccgcctgccgttcctgcccatgggccttgcgcgcgtggaactgccgcccgcctcc
ttccttcaggccaccgccgccggcgaggcgctgctggcgcaggcggtgggagaaggggtg
gagggcgccagaagcgtcgccgatctcttctgcggcgtcggcaccttcgcgctgcggctc
gccagccacgcccgcgtgcgcggctatgagagcaacgagactgccatcaccgccctgctc
aaggccatccgtggcacgcagggcctcaagagcgtggaaggcgaggtgcgcgacctcttc
cgccggccgctgatggcgcaggagctggagaagttcgaggccgtggtcatcgatccgccc
cgccagggggcggaggcgcaggcacgcgaactcgcccgctcgaaggtggaacggctcgtc
tatgtgtcctgctcggcccagaccttcgcgcgcgacgcccgcctgctgatcgacggcggc
ttccgccttgagcgcgtgacgccctatgaccagttccgctattcgccccatgtggaactc
gtgggccacttccaccgctag
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