Azorhizobium caulinodans: AZC_3627
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Entry
AZC_3627 CDS
T00609
Name
(GenBank) ribonuclease E and G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
azc
Azorhizobium caulinodans
Pathway
azc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZC_3627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azc03019
]
AZC_3627
03009 Ribosome biogenesis [BR:
azc03009
]
AZC_3627
Enzymes [BR:
azc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AZC_3627
Messenger RNA biogenesis [BR:
azc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZC_3627
Ribosome biogenesis [BR:
azc03009
]
Prokaryotic type
rRNA processing factors
AZC_3627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BAF89625
UniProt:
A8IFL2
LinkDB
All DBs
Position
4161994..4165275
Genome browser
AA seq
1093 aa
AA seq
DB search
MANKMLIDATHPEETRVVVVRGNRVEEFDYESASRKQLRGNIYLAKVTRVEPSLQAAFIE
YGGNRHGFLAFSEIHPDYYQIPVADRQALIEEEERAARAAEDEEERRERRRERSRHKRAA
APEVEAADEEAEDSDVEEVEDEEVIDTIEDGTIISSFSDEEDDEDEDEDAEVEPLDPETL
PRETDVAHIAAAEDGVEADAPVVSHAVVAEAEPEAAAPEAPAEALPAPAEQPVQPEAEPQ
VQAEQAAAAEVESKPMLASGDAVLSEPAEPAPATGSEAPEASAANDAGEEAAEAGASEAD
AAEGEAAEVEAEAEPVRAPREDRRRRRSRHRNRKPVEDETDGESEDGEEEDEGVEQMGSD
DALEEVPERAPQRRARTYKIQEVIRRRQVMLVQVVKEERGNKGAALTTYLSLAGRYSVLM
PNTARGGGISRKITNAVDRKRLKEVVQELEVPEGMGIILRTAGANRTKVEIKRDFEYLLR
LWETVRELTLTSSAPNLVYEEGSLIKRAIRDLYSKEIDEIHVAGEEGFQEARDFMRMLMP
SHAKNVIAYREPQPIFAKYGVEHQLDAMFSPVVQLKSGGYIVINPTEALVSIDVNSGRAT
REHHIEDTALKTNMEAAEEIARQLRLRDLAGLIVIDFIDMEEKRNNRSVERKLKDCLKND
RARIQVGRISHFGLMEMSRQRIRTGVLESSIEVCPVCGGTGHVRSAASVALQLLRALEEQ
LLRSASHNLIARTRGEVALYVLNHKRAHLRELEDRFSVTLIVQADESVTGHQPFLIEKGE
IAAPPAPAPRLSSAVHPDSILPDEDYEDDEEELEESAEAEAEDESEGEAVASERGDDQPR
KRRRRRRRRGGERESRADDANGSDEDGAEGDDETESASGEGDDEARAEGEDRSEADSAER
RRRRRGRRGGRRNRREGEAGSGDETSADAEADGESAEGEGLESDGQEPARALSFPGQETF
AEIEATSSESPSHEASSNEPPVTADPPLPEPVVVPEVLAPAPAAEPEAPAAPAPRRRSTV
REKAPVSGAASSAPTEAAPAPQAPTEPASEPVEAAPESPVEPAVAQAEEAPAAPAAPPAK
PRTGWWQRKLFGE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaagatgcttatcgatgccacccacccggaggagacccgggtggtggtcgtg
cgcggcaaccgggttgaggaattcgactacgagtccgcatcccgcaagcagctgcgcggc
aacatctatctcgccaaggtcacgcgcgtggagccctcgctccaggcggccttcatcgaa
tatggcggcaaccgccacggcttcctcgccttcagcgagatccatcccgactattaccag
atccccgtcgccgaccgtcaggcgctgatcgaggaagaggagcgcgccgcccgcgccgcc
gaggacgaggaggagcgccgcgagcgccgccgcgagcgatcccgccacaagcgcgccgcc
gcccccgaggtcgaggccgccgacgaggaagccgaggacagcgacgtcgaggaagtcgag
gacgaggaggtcatcgacaccatcgaggacggcaccatcatctcctccttctccgacgag
gaggacgacgaggacgaggatgaggacgccgaggtcgagccgctcgacccggagacgctg
ccccgcgagaccgacgtcgcccacatcgctgccgccgaggatggcgtcgaggccgatgcg
ccggtggtgagccacgccgtggtggccgaggccgagcctgaggccgctgcccccgaggcg
ccggctgaagccctgcctgcgcccgccgagcagcccgtccagccggaagccgagccccag
gttcaggccgagcaggccgccgccgccgaagtcgaatcgaagcccatgctggcctcgggc
gacgccgtgctgagcgagccggccgagccggcgcccgccaccgggtccgaagcgccggaa
gcctctgcggccaacgacgccggtgaagaggccgcggaagccggcgcctccgaggcggac
gctgccgagggcgaagccgccgaagtcgaggcggaagccgagcccgtgcgtgccccgcgc
gaggatcgccgccgccgccgctcccgccaccgcaaccgcaagcccgtcgaggatgagacg
gacggcgagagcgaggacggcgaagaggaagacgagggcgtcgagcagatgggctccgac
gacgcgctggaggaggtgcccgagcgcgcaccccagcgtcgtgcccgcacctacaagatc
caggaagtcatccgccgccgccaggtgatgctggtgcaggtggtcaaggaggagcgcggc
aacaagggcgccgccctcaccacctatctctcgctcgccggccgctactcggtgctcatg
ccgaacaccgcccggggtggcggcatctcgcgcaagatcaccaatgcggtcgaccgcaag
cgcctgaaggaagtggtgcaggagctggaggtgcccgaagggatgggcatcatcctgcgc
accgccggcgccaaccgcaccaaggtggagatcaagcgcgacttcgaatatctcctgcgc
ctgtgggagacggtgcgcgagctgacgctgacctccagcgcgccgaacctcgtctatgag
gaaggctccctcatcaagcgcgcgatccgcgatctctacagcaaggagatcgacgagatt
cacgtggccggcgaggagggcttccaggaagcccgcgacttcatgcgcatgctcatgccg
agccatgcgaagaacgtcattgcctatcgtgagccgcagccgatcttcgccaagtatggc
gtggagcatcagctcgacgcgatgttctcgcccgtcgtgcagctcaagagcggcggctac
atcgtcatcaacccgaccgaggccctggtctccatcgacgtgaactccggccgcgccacg
cgcgagcaccacatcgaggacaccgcgctcaagacgaacatggaagccgccgaggaaatc
gcccggcagctccgcctgcgcgatctcgcgggcctgatcgtcatcgacttcatcgacatg
gaggagaagcgcaacaaccggtcggtggagcgcaagctcaaggattgcctgaagaacgac
cgcgcccgcatccaggtgggccgcatctcgcacttcggtctcatggagatgtcccgccag
cgcatccgcaccggcgtgctcgaaagctccatcgaggtgtgccccgtctgcggcggcacc
ggccatgtccgctccgccgcctcggtggcgctccagctgctgcgcgcgctggaagagcag
ctcctgcgctcggccagccacaatctcatcgcccgcacccgcggcgaggtggcgctctac
gtgctcaaccacaagcgcgcgcacctgcgcgagctggaagaccgcttctccgtcaccctc
atcgtccaggcggacgagagcgtgaccggacaccagcccttcctgatcgagaagggcgag
atcgccgccccgcccgccccggccccgcgcctcagctccgccgtccaccccgattccatc
ctgccggatgaggattatgaggacgatgaggaggaactggaggagagcgccgaggccgaa
gccgaggacgaaagcgagggcgaggccgtcgcgtccgagcgcggcgacgaccagccgcgc
aagcgtcgccgccgccgccgtcggcgtgggggcgagcgcgaatcgcgcgccgatgacgcc
aacggctccgacgaggacggcgccgagggcgatgacgagaccgaatccgcatccggcgag
ggcgacgacgaagcccgcgccgagggcgaggaccggtcagaggccgacagcgccgagcgc
cgccgccgccgccgcggccgccggggcggtcgccgcaatcgccgcgaaggcgaggccggt
tccggtgacgagacctccgcagacgccgaagccgatggcgagagcgcggaaggcgagggc
ctcgagagcgacggccaagagccggcgcgcgcgctgagcttccccggccaggagaccttc
gcggagatcgaggccacctcgagcgaatccccctcccacgaagcgagctccaacgagccc
cctgtcaccgccgatcccccgctgccggagccggtcgtagttcccgaggttctggcgccg
gcgcccgctgccgagcccgaggcgcctgccgccccggccccccgtcgccggtccacggtg
cgcgagaaggcacccgtgagcggcgccgcaagctccgcgcccaccgaggccgctccggcg
ccgcaggctcccacggaacccgcgtccgagccggtggaggccgcccccgaatccccggtc
gagccggcggtggcgcaggcggaagaggcgcctgcagcgccagccgccccgcccgctaag
ccgcgcaccggctggtggcagcgcaagctgttcggcgagtga
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