Azoarcus sp. DN11: CDA09_03780
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Entry
CDA09_03780 CDS
T05691
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
azd
Azoarcus sp. DN11
Pathway
azd03030
DNA replication
azd03430
Mismatch repair
azd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDA09_03780
03430 Mismatch repair
CDA09_03780
03440 Homologous recombination
CDA09_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azd03032
]
CDA09_03780
03400 DNA repair and recombination proteins [BR:
azd03400
]
CDA09_03780
Enzymes [BR:
azd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDA09_03780
DNA replication proteins [BR:
azd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDA09_03780
DNA repair and recombination proteins [BR:
azd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDA09_03780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Fox-1_C
Motif
Other DBs
NCBI-ProteinID:
AYH42514
LinkDB
All DBs
Position
849611..853105
Genome browser
AA seq
1164 aa
AA seq
DB search
MTASHEPRFIHLRLHSEYSISDGIVQIDQAIARAVADGMPALGISDLANLFGMVKFYKGA
RGKGMKPIIGVDAWITNGTDRDKPFRVLLICKNRKGYGQMCELLTQAYLDNKYRGRAEMR
REWFADGAASELLCLSGARDGDIGQALGNGNVELAERLAAEWAALFPEAFYIELQRAGHP
GAEAYVRQAVQLAGRLGLPVVATHPVQFLKREDFKAHEARVCIAQGYVLADKRRPRDYTE
EQYLKSQAEMCELFADLPEALENSVEIARRCSVTVQLGKNFLPQFPTPEGMTLDDYLIAE
AKAGLEVRLKELYPDDAERERQRPTYEARLKFETDTIVQMGFPGYFLIVADFINWGKQNG
VPVGPGRGSGAGSLVAYSLRITDLDPLAYALLFERFLNPERVSMPDFDIDFCQDNRYRVI
EYVRERYGKDAVSQIATFGTMASKAVVRDVGRVLDLPYGLCDRLSKLIPIEGAKPVSLAK
AYELEPQIGEMMQDGNDGESVQELWGLAEPLEGLSRNVGMHAGGVLIAPGKLTDFCPLYI
ADGDDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELAVDYVERLTGEKPDLAALPFTD
PAAYQILKDANTTAIFQVESDGMKKLLKKLAPDRFEDIIAVLALYRPGPLGSGMVDDFIL
RKKGQQEIDYFHPDLKPCLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKAD
EMAKHRETIAAGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVVTYHTAWLKAHH
CAAFMAATMSADLDNTDTIKIFFEDTIANGIKVLPPDVNQSDYRFVPTDRKTIRYGLGAV
KGVGEPAVRSILAARQSGGPFKDLFDFCARVDRRMVNRRVIEALIRSGAFDLIEPSGAAD
RARLLATVSLAMEAAEQAAANAMQGGLFDLVPEAAGAAPEYVSVRPWTERERLKEEKLAI
GFFLSGHPFNSFKDEVRRFIRRSLSQLEPSRDLAMLAGVVMDVRTKMTNRGKMAFVVLDD
GTQVREVSVFSEVFDANRTRIVTDEVLVVEGKVSNDDFTGGLRIIADRLMTLGEARSRFA
KALQLTVNGEVKRAGSAAAAADKLETLLTPFRDGVCPISLRYRNDQAEGELPLGAGWRVR
LDDALLDSLREWLPPGAVEVLYPN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctctcacgaacctcgcttcatccacctccgtctgcactccgaatactcgatc
tcggacggtatcgtccagatcgaccaagcgatcgcacgcgccgtcgccgacggcatgccg
gcgctggggatctcggaccttgccaacctgttcggcatggtcaagttctacaagggcgcg
cgcggcaagggcatgaagcccatcatcggcgtcgacgcctggatcaccaacggcaccgac
cgcgacaagcccttccgcgtcctgctgatctgcaagaaccgcaagggctacgggcagatg
tgcgagctgctcacccaggcctatctcgacaacaagtaccgcggtcgcgcggagatgcgc
cgcgaatggtttgccgacggtgccgcgtccgagctgctgtgcctgtcgggcgcgcgcgac
ggtgatatcggccaggcattggggaacggcaacgtcgagctcgccgagcgcctcgccgcg
gaatgggccgcgctgttccccgaggcgttctacatcgaactgcagcgcgcgggtcacccc
ggcgccgaggcttacgtgcgtcaggccgtccagctcgccggcaggctcggactgccggtg
gtcgcgacgcatcccgtgcagttcctcaagcgtgaggacttcaaggcgcacgaggcgcgc
gtgtgtatcgcgcaggggtacgtgctggccgacaagcgccgtccacgcgactacaccgag
gagcagtacctcaagagccaggccgagatgtgcgagctcttcgccgacctccccgaagcg
ctcgagaattcggtggaaatcgcacgccgctgctcggttaccgtgcagcttggcaagaac
ttcctgccgcagttcccgacgccggaaggcatgacgctcgacgattatctgatcgccgag
gccaaggcagggctcgaagtgcgcctgaaggagctgtatccggacgatgccgagcgcgag
cgccagcgcccgacctacgaggcgcggctgaagttcgagaccgacaccatcgtgcagatg
ggctttcccggctactttctgatcgttgccgacttcatcaactggggcaagcagaacggc
gtgccggtcggccccggccgcggctcgggtgccggttcgctcgtcgcgtacagcctgcgc
atcaccgatctcgaccctctcgcctacgcgctgctgttcgagcgcttcctgaacccggaa
cgcgtgtcgatgcccgacttcgacatcgacttctgccaggacaaccgctaccgcgtcatc
gagtacgtgcgcgagcgctacggcaaggacgcggtcagccagatcgcgaccttcggcacg
atggcctcgaaggccgtggtgcgcgacgtcggccgcgtgctcgatctgccttacggcctg
tgcgaccggctgtcgaagctgatcccgatcgagggcgcgaagcccgtctcgctggcgaag
gcctacgagctggagccccagatcggcgagatgatgcaggacggcaacgacggcgagtcg
gtgcaggagctgtggggattggccgagccgctcgaagggctctcgcgcaacgtcggcatg
cacgcgggcggcgtgctgatcgcgccgggcaagctcaccgacttctgccccttgtacatc
gccgacggcgacgatgcgacgccggtgtcgcagttcgacaaggacgacgtcgaggcggtc
ggcctggtgaagttcgacttcctcggcctgcgcaacctcaccatcatcgagctcgccgtc
gactacgtcgagcgcctcaccggcgagaagcccgatctcgccgcgctgcccttcaccgat
ccggcggcctaccagatcctgaaagacgcgaacaccaccgcgatcttccaggtggaatcg
gacgggatgaagaagctcctcaagaagctcgcgcccgaccgcttcgaggacatcatcgcg
gtgctcgcgctctaccgtccgggcccgctcggctcgggcatggtggacgacttcatcctg
cgcaagaagggccagcaggagatcgactacttccacccggatctcaagccctgcctcgaa
ccgacctacggcgtgatcgtgtatcaggaacaggtgatgcagatctcgcagatcatcggc
ggctacacgctcggcggcgccgacatgctgcgccgcgcgatgggcaagaagaaggccgac
gagatggccaagcaccgcgagacgatcgctgcgggggcaaagcagaagggctacgacccg
gcgctcgccgagcagcttttcgacctgatgacgaagttcgcggagtacggcttcaacaag
tcgcacaccgccgcatacgcggtcgtcacctaccataccgcgtggctcaaggcgcatcac
tgcgcggccttcatggccgcgacgatgtccgccgacctcgacaacaccgacacgatcaag
atcttcttcgaggacacgatcgcgaacggcatcaaggtcttgcccccggatgtgaaccag
tccgactaccgcttcgtgccgaccgaccgcaagacgatccgctacggcctcggcgcagtg
aagggggtcggcgaaccggcggtgcgctcgatcctcgccgcccggcagtccggcggcccg
ttcaaggatctcttcgatttctgcgcccgcgtcgaccgccgcatggtcaatcgccgcgtg
atcgaggcgctgatccggtcgggggcgttcgacctgatcgaacccagcggcgccgccgac
cgtgcgaggttgctcgcgaccgtgagcctcgcgatggaagctgccgagcaggcggcggcg
aacgcgatgcagggcggcctgttcgacctggtgcccgaggccgccggagcggcgcccgag
tacgtgagcgtgcgcccgtggacggagcgcgagcggctgaaggaggagaagctcgcgatc
ggcttcttcctctctggccatccgttcaacagcttcaaggacgaagtgcggcgcttcatc
cggcgctccctctcgcagctcgagccgtcgcgtgatctcgcgatgctcgcgggcgtcgtg
atggacgtgcgcacgaagatgaccaaccgcggcaaaatggccttcgtcgtgctcgacgac
ggcacgcaggtgcgggaggtgtcggtcttctccgaagtgttcgacgctaaccggacccgg
atcgtcaccgatgaggtgctggtcgtcgaaggcaaggtcagcaacgacgacttcacgggc
ggcctacgcatcattgccgaccggctgatgaccctgggcgaagcccgctcgcgttttgcg
aaggcgctgcaactgacggtcaatggtgaggtgaagcgcgccggcagtgccgccgcggcc
gccgacaagctggaaaccctgctgacgcctttccgcgacggcgtctgcccgatctccctg
cgctaccgcaacgatcaggccgaaggcgaactcccgctcggggcgggctggcgcgtgcgc
ctggatgacgccctgctcgacagcctgcgcgagtggctgcctccgggcgcggtcgaagtc
ctgtatccgaactga
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