Azoarcus sp. DN11: CDA09_08005
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Entry
CDA09_08005 CDS
T05691
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
azd
Azoarcus sp. DN11
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
azd03000
]
CDA09_08005
Transcription factors [BR:
azd03000
]
Prokaryotic type
Helix-turn-helix
Other families
CDA09_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
HTH_30
PAS_4
PAS
HTH_23
HTH_7
AAA_5
AAA_16
HTH_20
HTH_Tnp_1
HTH_22
HTH_28
HTH_29
Mg_chelatase
HTH_1
PAS_8
HTH_Tnp_ISL3
AAA_3
AAA_2
HTH_17
AAA
Motif
Other DBs
NCBI-ProteinID:
AYH43324
LinkDB
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Position
1751499..1753535
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AA seq
678 aa
AA seq
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MAVLPQLRDRRENTVSDARRFFFELGQTPEAGLAAPVLRSWQRCRTDGLDHLDAYLIDPA
GRAQLSDARDRSARLLEHAGGIMEHVFEQIRASGSMVILADTRGMILHCLGDPDFVGRAQ
RVALQPGASWDEHVRGTNAIGTAILESAPVEIHGAEHYLERNGFLTCSAAPVFNAQGRIA
GVLDISGDSRNNQRHTLGLVRLSVQLLEKRLFEAEFAREIRIAFHPRPEYVGSLQEAMLA
VDADGRIVGANPVAREWLGLGAGLAEAPSFGTLFRTGFGQLLDRAANAPDDLLLLEMRRG
EAVYVQVRGHRRTRPEAPAARLQDAAPQAAKAAAKTADGSKHRITLDCLATGDARLQLAL
DRARRVQGKDIPLLIQGESGVGKELFARAFHNSGVRSDGPFVALNCAAIPENLIESELFG
YVGGAFTGARREGAVGKLQQAHGGTLFLDEIGDMPLGMQARLLRVLQERSVTPIGSMKSI
PVDISLVCATHRVLRDAVKQGLFREDLYYRVNSLTVTLPPLRERTDIRSIVANLLELESA
DRHSGPIDISEEVMSFFERYPWPGNVRQLQNVIRVAVALLDDNEHEIASIHLPEELFGID
GEDGGEAFAPAASMSGGSVAAATATPTPVAATGARSLDEIELDAIATVMREVGGNVSAAA
RRLGVSRNTLYRKLGRMG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctgtattgccgcaattgcgggatcgccgcgagaacaccgtttcggacgcgcgacga
tttttcttcgagcttggccagacgccggaggccgggctcgctgctcccgtgctgcgttcc
tggcaacgctgccggaccgacgggctcgaccacctcgatgcctacctgatcgacccggcg
ggccgcgcccagctctccgatgcacgcgaccgcagtgctcggctgctcgagcacgcgggc
gggatcatggagcatgtgttcgagcagattcgcgcctcgggcagcatggtcatcctggcc
gacacgcgaggcatgatcctgcactgcctcggcgacccggatttcgtcggccgcgcgcaa
cgcgtcgcgctccagcccggcgcgtcatgggacgagcacgttcgcggcaccaacgcaatc
ggcaccgcgatcctggagagcgccccggtcgaaatccacggcgccgaacactacctcgaa
cgcaacggcttcctgacctgcagtgcagcaccggtattcaacgcccagggacgcatcgcg
ggcgtgctcgacatctcgggcgactcgcgcaacaaccagcgccacaccctgggtctcgtg
cgcctctcggtgcagttgctcgaaaagcgcctgttcgaggccgagttcgccagggaaatc
cgcatcgccttccatccccgccccgagtacgtcggcagtctgcaggaggcaatgctcgcg
gtcgatgcggacggccggatcgtcggcgccaaccccgtcgcgcgcgagtggctcggcctc
ggcgccgggctcgccgaggcgccgtccttcggcacgctcttccgcaccggcttcggccag
ctgctcgaccgcgcggccaacgcacccgatgacctgctgctgctcgaaatgcgccgcggt
gaagccgtctacgtgcaggtgcgcggccaccggcgcacgcgcccggaagccccggccgcc
aggttgcaggacgccgcgccccaagcggcgaaggctgcggcgaaaaccgccgacggatcg
aagcaccgcatcacgctcgactgcctcgcgaccggcgacgcgcgcctgcaactcgcgctc
gaccgcgcgcgccgcgtccagggcaaggacatcccgctgctgatccagggcgagtcgggc
gtcggcaaggaactcttcgcgcgcgccttccacaacagcggcgtgcgcagcgacggcccg
ttcgtcgcgctcaactgcgcggcgattcccgagaacctcatcgaatcggaactcttcggc
tacgtcggcggtgccttcaccggcgcgcggcgcgagggcgcggtcggcaagctgcagcag
gcccacggcggcaccctgttcctcgacgagatcggcgacatgccgctcggcatgcaggcg
cgcctgctgcgcgtgctgcaggagcgcagtgtcacgccgatcggctcgatgaaatcgatc
ccggtcgatatctccctcgtctgcgcgacgcatcgcgtgctgcgcgacgcggtgaagcag
gggctgttccgcgaagacctctactaccgcgtcaatagcctcaccgtcacgctgccgccg
ctgcgcgaacgcaccgacatccgcagcatcgtcgcgaacctgctcgagctcgagtcggcc
gaccggcacagtgggccgatcgacatcagcgaagaggtcatgagcttcttcgaacgctat
ccctggcccggcaacgtccgccagctccagaacgtcatccgcgtcgcggtcgcgctgctc
gatgacaacgaacacgagatcgcgtcgatccatctgccggaggaactcttcggcatcgac
ggcgaggacggcggcgaagcctttgcgccggccgcgtcgatgtcgggtgggtccgtcgct
gctgctaccgcgacgcccacgccggtggccgcgacgggtgcgcgcagtctggacgaaatc
gaactcgacgcgatcgcgacggtcatgcgtgaagtgggtggcaacgtctctgccgccgcg
cgtcgcctcggtgtcagtcggaacactctctatcgcaagctcggacggatgggctga
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