Azoarcus sp. DN11: CDA09_08340
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Entry
CDA09_08340 CDS
T05691
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
azd
Azoarcus sp. DN11
Pathway
azd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDA09_08340 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
azd03000
]
CDA09_08340 (nifA)
Transcription factors [BR:
azd03000
]
Prokaryotic type
Helix-turn-helix
Other families
CDA09_08340 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
HTH_8
AAA_5
GAF_3
AAA_16
AAA
AAA_2
Mg_chelatase
bpMoxR
TIP49
DUF815
TniB
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AYH43390
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Position
1817154..1818797
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AA seq
547 aa
AA seq
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MSYGKPGHSSELELLTIYEISKVLTGTLNFRQSVRNVLKLLLTQLQMEHGIVGLVQDDGK
LHIIGAAGVPWPLDEAPVLDISEGMVAQVLRHGSPIVVPDLTKDPLFLNRTGHNPDDVAG
TAYIVVPVKSEREVIGILSADRKPGGERPINFERDVRILSLVANLLGQTYQLHRAVAVDR
QHLLEETSRLQKQLQGRYDIENVVGKSKRMKEVFADVHQAARGSDATVLLRGESGTGKEA
IAHAIHYLSARSKGPFVKLNCAALPETLLESELFGHEKGAFTGATSERKGRFEMANGGTV
FLDEIGDISPAFQAKLLRVLQEHEFERVGGSKTIKTDVRLVAATNRNLEEMVQKGEFRAD
LYFRLNVVTIFLPPLRERKDDIPLLVDFFLSRFNTENNRALAITSGAVEILMQCNWPGNV
RELENCIQRAATMTRGNLIRESDMRCQKGQCFSAMLLETTQSRSCFPVVAAPPSRIRSAA
SLPIVPGEPAATRAGEGGAVSADERTRLIDAMERCGWVQAKAARLLGLTPRQIGYALRKQ
GVEMKRL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatggcaagcccggtcattcgtccgagctggaactgctgaccatctacgagatc
agcaaggttctcaccggcacgttgaacttccggcaatcggtgcggaacgtcctcaagctg
ctgctgacgcagctgcagatggaacacggcatcgtcggactggtgcaggacgatggaaaa
ctgcacatcattggtgcggcgggcgtgccctggccgctcgacgaggcgccggtgctcgat
atctcggagggcatggtcgcccaggtgctgcgccacggctcgcccatcgtcgtccccgac
ctgacgaaggatccgctgttcctcaaccgcaccggacacaatccggacgacgtcgcgggc
acggcctacatcgtcgtgccggtgaagagcgagcgcgaggtgatcggcatcctgtcggcc
gaccgcaagcccggcggcgagcggccgatcaacttcgagcgcgacgtgcgcatcctgtcg
ctggtggcgaacctcctgggccagacgtatcagctgcaccgggcggtggcggtcgaccgc
cagcacctgctggaggaaaccagccggctgcagaaacagctgcagggccggtacgacatc
gagaacgtcgtcggcaaatcgaagcgcatgaaggaggttttcgcggacgtgcatcaggcg
gcccgcggctcggacgcgacggtgctgctgcgcggcgagtcgggtaccggcaaggaggcc
atcgcgcacgccatccattacctgtcggcgcgcagcaagggacccttcgtcaagctcaac
tgcgcggccctgccggaaacgctgctggagtccgagctcttcggccacgagaaaggcgcc
ttcaccggcgcgacctcggagcgcaagggacgcttcgagatggcgaacggcggcacggtc
ttcctcgacgagatcggcgacatctcgccggccttccaggccaagctgctgcgcgtgctg
caggagcacgagttcgagcgggtcggcggcagcaagacgatcaagaccgacgtccgcctc
gtggcggcgacgaaccgcaacctggaggagatggtgcagaagggggaattccgcgccgat
ctctatttccgcctcaacgtcgtgacgatcttcctcccgccgctgcgcgagcggaaggac
gacatcccgctgctggtggatttcttcctgtcgcgcttcaacacggagaacaaccgcgcg
ctggcgatcaccagcggcgcggtggagatcctgatgcagtgcaactggccgggcaatgtg
cgcgaactggagaactgcatccagcgggccgccaccatgacccgcggcaacctcatccgc
gaaagcgacatgcgctgccagaagggccagtgcttctcggcgatgctgctggagaccacc
cagtcgcgcagctgctttccggtggttgcggcgccaccgtcacggatacgttccgccgca
tcgctgccgatcgtgccgggcgaaccggcggcaacccgcgccggcgaaggcggtgcggtg
tccgccgacgagcgcacccgcctgatcgacgcgatggagcgctgcggctgggtccaggcc
aaggccgcgcgcctgctgggcctcaccccccgccagatcggctacgcgctgcgcaagcag
ggggtcgagatgaagcgcctgtag
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