Azoarcus sp. DN11: CDA09_11340
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Entry
CDA09_11340 CDS
T05691
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
azd
Azoarcus sp. DN11
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
azd03000
]
CDA09_11340
Transcription factors [BR:
azd03000
]
Prokaryotic type
Helix-turn-helix
Other families
CDA09_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
HTH_23
HTH_30
Mg_chelatase
AAA_5
HTH_20
PAS_4
HTH_7
HTH_29
TrmB
nSTAND6
PAS
HTH_22
HVO_A0261_N
AAA_2
Mga
TsaE
AAA
HTH_11
AAA_3
HTH_Tnp_ISL3
HTH_28
AAA_16
HTH_26
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AYH43975
LinkDB
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Position
2479881..2481899
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AA seq
672 aa
AA seq
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MSSMLEPRGHAHRVHEVVEGRGSGTNDLVTSSWARCLKDYHLDPDKPLHPTVLAERALEE
RRKHSADVIDCAKLEMTTLYQQLGDRESAVVLVDTEGTILHMVAAPEFAREMGKVGFCPG
AVWSESAVGTNGMGTCLVVGEPVAVRQQDHFFGVYTSLTCSAVPIFDPDGALVAVLDVTS
RSQLMQQHSLVLLGMTAQMIENRLLDLRFREACPVHFHSRPEFVYTLHEGKLVVADDGSI
RAANRSALFQLGYPSVHAIRGKKIDEVFQTTLADILQRSARSSFHPVPTFCTQRSNRFFV
VAQEPATLSVPSVERAGARQLVASLPPVRGPECSFGDDRIASQLNVAARVIAKQIPVLLH
GETGAGKEVFARALHKGSPFASGAFVAVNCASLPESLIESELFGYRAGAFTGAQRTGRRG
KILQADRGTLFLDEIGDMPLTLQARLLRVLDERQISPLGTEETIPVDFQLVSASHRNLPK
LVADGVFREDLYYRLSGLEVSLPPLRERADKRELLYRVLQEEAAGQRMTIDPDAEALLMS
HPWPGNLRQLRHVLRTAVVLAAGDRLRLEDLPPALRQRIATRPEPLAAPPAALREPEVTA
GSSEPGGDYGDDELAALNPVQASERAVLLGLLEQQRWNVSNVAKALDISRNTLYRRLHRL
RIPLSHSDFPVQ
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgatgcttgagccccggggccatgcgcaccgggtccatgaggtggttgaaggg
cggggaagcggaaccaacgatctggtgacgagctcctgggcccgctgtctaaaagattac
catctcgaccccgacaagcccctgcacccgacggtgctcgccgaacgtgcactcgaagag
cggcgcaagcactccgccgacgtcatcgactgcgcgaaactcgaaatgaccaccctgtac
cagcagctcggcgaccgcgagtcggcagtggtgctggtggataccgaaggcaccatcctg
cacatggtggccgcgccggagttcgcgcgcgagatgggcaaggtcggcttctgccccggc
gcggtgtggagcgagtcggcggtcggcacgaacggcatgggcacctgcctcgtcgtgggc
gagccggtcgcggtgcggcagcaggaccatttcttcggcgtctatacgtcgctgacgtgc
tcggccgtgccgatcttcgatcccgatggtgccctcgtcgcggtgctcgacgtcacgagc
cgctcgcagctgatgcagcagcactcgctggtgctgctcggcatgaccgcgcagatgatc
gagaatcggctcctcgacctgcgctttcgcgaagcgtgcccggtccacttccacagccgc
ccggagttcgtgtacacgctgcacgagggcaagctggtcgtcgccgacgacggcagcatc
cgcgcggccaaccgcagcgcgctgttccagctcggttatccgtcggtgcatgcgatccgc
ggcaagaagatcgacgaggtgttccagacgaccctggcggacatcctgcagcgcagcgcc
cgcagctccttccatccggtgccgaccttctgcacgcagcgctcgaaccgcttcttcgtc
gtcgcgcaggagccggcgacgttgtccgtgccgagcgtcgagcgcgccggcgcgagacag
cttgttgccagcctgccccctgtccgcgggccggaatgttcgttcggcgacgatcgcatc
gcttcgcagctgaatgtggccgcgcgcgtcatcgcgaagcagattcccgtgttgctgcac
ggcgagaccggtgcgggcaaggaagtgttcgcgcgcgccctgcacaagggcagcccgttc
gcatcgggcgcctttgtcgccgtgaactgcgcgtcgctgcccgaaagcctgatcgagagc
gagctgttcggttaccgcgccggggctttcaccggagcgcagcgcacggggcggcgcggc
aagatcctgcaggccgaccgtggcacgctgtttctcgacgagatcggcgacatgccgctt
acgctgcaggcccggctcttgcgtgtactcgatgagcgccagatttcgccgctcggcacc
gaggagacgatccccgtcgacttccagctcgtcagcgcaagtcaccgcaacctgccgaag
ctcgtcgccgacggagtgttccgcgaggatctgtattaccgcctgtccggcctggaggtg
tcgctgccgcccttgcgcgagcgcgccgacaagcgcgagctgctgtaccgggtcctgcag
gaggaggcagcggggcagcggatgacgatcgatccggacgccgaggccttgctgatgagc
cacccgtggccgggcaatcttcgccagctgcgccacgtgctgcgaaccgcggtcgtgctc
gcggcgggcgaccggctgcggctcgaggacctgccaccggccctgcggcaacgcatcgca
acacggcccgaaccgctggccgcgccgcctgccgcgctgcgcgaaccggaagtgacggcg
ggaagcagcgagcccggtggcgattacggggacgacgaattggcggcgctcaatccggtt
caggccagcgagcgtgcggtgttgctcggcctgctcgaacaacaacgctggaatgtgagc
aatgtcgccaaagccctcgacatcagtcgaaacaccctgtatcgccgattgcaccgacta
cgcatcccgctctcccacagcgacttcccggtccagtga
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