Azoarcus sp. DN11: CDA09_14280
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Entry
CDA09_14280 CDS
T05691
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
azd
Azoarcus sp. DN11
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azd03016
]
CDA09_14280
Enzymes [BR:
azd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDA09_14280
Transfer RNA biogenesis [BR:
azd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDA09_14280
Prokaryotic type
CDA09_14280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AYH44539
LinkDB
All DBs
Position
complement(3103982..3104911)
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AA seq
309 aa
AA seq
DB search
MKTQKQFRHQRRALDGVLLLDKPQGMTSNAALQTARRLLNAAKAGHTGTLDPMATGLLPL
TFGEATKFSQMLLDADKEYEATVRLGIETDTGDAEGRPTASAPVAVTEEAIRAALVCLTG
EIEQIPPMYSALKRDGKPLYEYARAGIEVELTPRRVVIHALELLESGDENFRVRVACSKG
TYVRTLAIDLGRLLGCGAHLSALRRTRIGPFAVGAGTVTLAALEGVAADEREQLLAPADA
LVAHLPAVTLSRTQTTGLLQGRVLAVDCGKRGLVRVYGDGRFLGLGELADDGRLSPKRLV
ATGTTTQQS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgcagaagcagttcaggcaccagcggcgcgcgctggatggcgttctcctgctc
gacaagccgcagggcatgacgtcgaacgccgccttgcagaccgcgcgccggctgttgaac
gcggcaaaggcagggcacacggggacgctcgatccgatggcgacgggtttgctgccgctg
accttcggggaggcgaccaagttctcgcagatgctgctcgatgcggacaaggagtacgag
gcaaccgtccgcctcgggatcgaaaccgacacgggggatgccgagggccggccgaccgcc
agtgcgccggtggcagtgacggaagaagcgatccgtgcggcactggtatgcctgacggga
gagatcgagcagatcccgccgatgtattcggcgctcaagcgcgacggcaagcccttgtat
gagtacgcgcgcgccggcatcgaagtcgaattgacgccgcgacgcgtggtcattcatgcc
ctcgagttgctggaatcgggggacgagaatttccgggtccgcgtggcgtgcagcaagggg
acctatgtccgtacgctcgcgatcgaccttggtcgcctgctcggttgcggtgcccacctg
tcggcgcttcggcgcacgcgcatcggcccctttgcagtgggggcgggcacggtgacgctc
gcggcgctcgagggcgttgcggccgacgagcgtgaacagctgcttgcgcctgccgacgcg
ctcgtggcccatttgccggcagttactctctcccgcacgcagaccacgggtttgctgcaa
gggcgggtgctggcggtcgattgcgggaagcgggggctcgtgagggtttacggggacggg
cgctttctggggctgggggaattggctgatgatggccgcctgtcgccaaaacgcctcgtt
gcaaccggtacaactacgcaacagtcttga
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