Azoarcus sp. DN11: CDA09_17320
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Entry
CDA09_17320 CDS
T05691
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
azd
Azoarcus sp. DN11
Pathway
azd02020
Two-component system
azd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDA09_17320
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CDA09_17320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azd03021
]
CDA09_17320
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
azd02035
]
CDA09_17320
Transcription machinery [BR:
azd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDA09_17320
Bacterial motility proteins [BR:
azd02035
]
Flagellar system
Flagellar assembly proteins
Stator
CDA09_17320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_IclR
DUF2336
UPF0122
Alpha-E
BTRD1
Motif
Other DBs
NCBI-ProteinID:
AYH45116
LinkDB
All DBs
Position
complement(3752619..3753395)
Genome browser
AA seq
258 aa
AA seq
DB search
MYDSAGNLDKNHLVEAYAPLVKRIAYHLMAKLPASVQMDDLIQNGMLGLLDAINRYEDGL
GAQFETYAVQRIRGAMLDGLRENDWLPRSMRRDMRRIETAIHELEQRHGRQPSETELAEL
LGMPLAEYQRMLQDARGYQLVHFEDFTDGEGEDYFERHLGEHESNPADILEQADMRNALV
RAIEDLPEREKLMMALYYDEELNLREIGEVLGVSESRVCQLHSQAVARLRSRILGTVRVA
GGTGARRGRPRKNPPAGG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtacgactcggcaggtaatctcgacaagaaccacctcgtggaggcctacgctccgctg
gtcaagcgcatcgcctaccacctgatggcgaagctgccggccagcgtgcagatggacgac
ctgatccagaacggcatgctgggcctgctcgatgcgatcaaccgttacgaggatggtctc
ggcgcgcagttcgaaacctacgcggtgcagcgcatccgcggcgcgatgctcgacggcctg
cgcgagaacgactggctgccgcgcagcatgcgacgcgacatgcggcgcatcgagacggcg
atccacgagctcgagcagcgccacggacgccagccgagcgagaccgagctcgccgaactg
ctggggatgccgctggccgagtaccagcgcatgctgcaggacgcgcgcggctaccagctg
gtgcatttcgaggatttcaccgacggcgagggcgaggactattttgagcgccatctcggc
gagcacgagtccaatccggccgacatcctcgagcaggccgacatgcgcaacgcgctcgtg
cgcgcgatcgaggacctgcccgagcgcgagaagctgatgatggcgctgtactacgacgag
gagctcaacctgcgcgagatcggcgaagtgctgggcgtgtcggagtcgcgtgtgtgccag
ctccacagccaggccgtcgcgcgcctgcgctcgcgcatcctgggcaccgtgcgggttgcc
ggcggtaccggcgcgcgccgcgggcggccgcggaagaatccgccggcgggcggctga
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