Azoarcus sp. DN11: CDA09_17835
Help
Entry
CDA09_17835 CDS
T05691
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
azd
Azoarcus sp. DN11
Pathway
azd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDA09_17835 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azd03019
]
CDA09_17835 (recQ)
03400 DNA repair and recombination proteins [BR:
azd03400
]
CDA09_17835 (recQ)
Enzymes [BR:
azd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDA09_17835 (recQ)
Messenger RNA biogenesis [BR:
azd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CDA09_17835 (recQ)
DNA repair and recombination proteins [BR:
azd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CDA09_17835 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
SaeA_1st
ResIII
Motif
Other DBs
NCBI-ProteinID:
AYH45214
LinkDB
All DBs
Position
3857716..3859536
Genome browser
AA seq
606 aa
AA seq
DB search
MTARPPLSPLHVLEHVFGYTAFRGEQQAIVEHVAAGGDALVLMPTGGGKSLCYQIPALLR
PGTAVVVSPLIALMQDQVSALQEAGVAAAYLNSSQAADESVTVERDLVVGRLDLLYVAPE
RLLTGRLLATLDRLHEAGRIALFAIDEAHCVSQWGHDFRPEYLQLSVLPERYPGVPRIAL
TATADAETREEIAQRLGLTAARRFISSFDRPNIRYRMVDKDNPRNQLLAFIRDDHAGEAG
IVYCLSRRKVEETAAWLEEQGIRALAYHAGMPQEVRAANQGRFLREDGLVMCATIAFGMG
IDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLASQAWMAWGAQDIVQQRRMIDESEGSE
DFKRRARARLDALVGLVETTACRRQHLLAHFGEAGAACGNCDNCLEPPRTWDATDAARKA
LSGVFRTGQRFGAGHVIDVLRGELTDKVRDWEHDKVSTFGIGADVDEKTWRTLFRQLVAR
GLLAVDHDRHNALTLTDLARPLLRGEADFALRLAPEKRRTKRARSTRMEILDGVPLTLFD
RLRAWRAATARERNVPAYVIFHDATLREIALARPTSIAELTRVSGIGDRKLEAYGDAIIA
EIRREV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgccccccgctctctccgctccacgtcctcgaacacgtcttcggctacacc
gccttccgcggcgaacagcaggccatcgtcgagcatgtggcggcgggcggtgacgcgctg
gtgctgatgcccaccggcggcggcaagtcgctgtgctaccagatcccggccctgctgcgc
cccggcaccgccgtggtggtgtcgcccctgatcgcgctgatgcaggaccaggtgagcgcc
ctgcaggaagcgggcgtagcggcagcctatctgaactccagccaggcggccgacgaatcc
gtcacggtggaacgcgacctcgtcgtcggccggctggacctgctgtacgtcgcgcccgag
cggctcctcaccgggcgcctgctcgcgacgctcgaccgcctgcacgaggccggccgcatc
gcgctcttcgcgatcgacgaggcgcactgcgtgtcgcagtgggggcacgacttccggccc
gaatacctgcagctctcggtgctgcccgaacgctacccgggcgtgccgcgcatcgcgctg
accgccacggccgacgccgagacgcgcgaggagatcgcgcagcgcctgggcctcaccgcc
gcgcggcgcttcatctcgagcttcgaccgccccaacatccgctaccggatggtcgacaag
gacaacccgcgcaaccagctgctcgccttcatccgcgacgaccacgccggcgaggcgggg
atcgtctactgcctgtcgcggcgcaaggtcgaggagacggccgcatggctcgaggaacag
ggcatccgcgcgctcgcctaccacgcgggcatgccgcaggaggtgcgcgcggcgaaccag
ggccgcttcctgcgcgaggacggactggtgatgtgcgcgacgatcgccttcggcatgggc
atcgacaaacccgacgtgcgcttcgtcgcccacctcgacctgccgcgctcgatcgagggc
tattaccaggaaaccggccgcgccggccgcgacggcctcgcctcgcaggcgtggatggcc
tggggggcgcaggacatcgtgcagcagcgccgcatgatcgacgagtcggaaggcagcgag
gacttcaagcgccgcgcgcgcgcgcgcctcgacgcgctggtggggctggtcgagaccacc
gcgtgccgccgccaacacctgctcgcgcatttcggcgaggccggcgcggcctgcggcaac
tgcgacaactgcctggagccgccgcgcacctgggacgcgaccgacgcggcacgcaaggcg
ctgtccggggtgttccgcaccggccagcgcttcggcgccggtcacgtgatcgacgtgctg
cgcggcgagctcaccgacaaggtacgcgactgggagcacgacaaggtgagcaccttcggc
atcggtgccgacgtggacgaaaagacctggcgcaccttgttccgccagctcgtcgcgcgc
gggctgctggccgtcgaccacgaccgccacaacgcgctgacgctcaccgatctcgcccgt
ccgctgctgcgcggcgaagcggatttcgccttgcgcctcgcacccgagaagcgccgcacg
aagcgcgcgcgcagcacccgcatggaaatcctcgacggcgtgccgctaacgctcttcgac
cgcctgcgcgcctggcgggcggcgaccgcgcgcgagcgcaacgtgccggcctatgtgatc
ttccacgacgccacgctgcgcgagatcgcgctcgcgcggccgacgtcgattgcggagctg
acacgcgtttccggcatcggcgaccgcaagctcgaggcctatggcgacgcgatcatcgcc
gaaatccggcgggaagtatga
DBGET
integrated database retrieval system
