Azoarcus sp. DN11: CDA09_18660
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Entry
CDA09_18660 CDS
T05691
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
azd
Azoarcus sp. DN11
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azd03016
]
CDA09_18660
Enzymes [BR:
azd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CDA09_18660
Transfer RNA biogenesis [BR:
azd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CDA09_18660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
AbfS_sensor
Myosin_N
Rbx_binding
Motif
Other DBs
NCBI-ProteinID:
AYH45375
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Position
4038376..4040289
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AA seq
637 aa
AA seq
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MFVLFEEDGAFKAGTILADNDSSLQVETSHGKRVKLKSSHVLMRFREPAPGELLNRAEAG
AEELDTAFLWEVCGEDEFAFDEFAAEYHGHAPNAVESASILLRLHSAPMYFHRKGRGRFR
KAPADILQAALAGLEKKRQQAEAIERMRAELVDGRMPAEIAAMLPQLLYRPDRNRVETKA
FEAACVDAGLSAPRLLLKCGALESSYDFHYNRFLFEYFEDGTAFPAFDAPTDPANLPLAR
VAAFSIDDATTTEIDDAFSVTPREGGGWRIGIHIAAPALGFARGSSLDAIARRRLSTVYM
PGNKITMLPDAVVESFTLAAGRDCPAVSLYLDVTAALAVQRHETVVERVPIVANLRHHDI
EPFFNEQVLHDHSGGPDFEWKRELTLLWDLANVLEAGRGKAEDNRNQIDFNFYVDWQTHT
EDGAGYVTISQRKRGSPLDKLVAEMMILANSTWGKLLDEAGVPGLYRVQSGGKVRMSTAA
GPHDGLGVDCYAWSSSPLRRYVDMINQWQIVSVLRDEAPAFAPKSADLMAALRDFDVTYA
AYADFQRQMERYWCLRWLRQQPGVAVDGKVLRDNLVRLDAIPLMVKVPSLPVMLPGTHVR
LTVEHSDLLDVDISARFVTMLAEPDPREAADAALEGN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgctgttcgaagaggatggggcgttcaaggccggcaccatcctcgctgataac
gattcctcgctgcaggtcgagacgtcccacggcaagcgcgtgaagctgaaaagcagccac
gtgctgatgcgctttcgcgagcccgcgccgggcgagctgctgaaccgcgccgaagccggc
gccgaggagctggacaccgccttcctgtgggaagtctgcggcgaggacgagttcgccttc
gacgagttcgccgccgagtaccacggccacgccccgaacgccgtcgagtccgcgagcatc
ctgctgcgcctgcactcggcccccatgtatttccaccgcaagggtcgcggccgcttccgc
aaggcgcccgccgacatcctccaggccgcgctcgccggcctggagaaaaagcgccagcag
gccgaggcgatcgagcgcatgcgcgccgaactcgtcgacggccgcatgccggccgagatc
gccgcgatgctgccgcagctcctctaccgcccggaccgcaaccgcgtcgaaaccaaggcc
ttcgaggccgcctgcgtcgatgccggcctgtccgcgccgcgcctgctgctcaaatgcggc
gcgctggaatcgagctacgacttccattacaaccgcttcctgttcgaatatttcgaggac
ggcacggccttcccggccttcgacgccccgaccgacccggctaacctgccgctcgcgcgg
gtcgccgcgttctcgatcgacgacgcgacgacgaccgagatcgacgacgccttctcggtg
acgccgcgcgaaggcggcggctggcgcatcggcatccacatcgccgcaccggcactcggc
ttcgcgcgcggctcctcgctcgacgcgatcgcgcgccggcgcctgtcgaccgtgtatatg
ccgggcaacaagatcacgatgctgcccgatgcggtcgtcgagtccttcacgctcgccgcc
gggcgcgactgccccgcggtgtcgctgtatctcgacgtcaccgcggcgctcgcggtccag
cgccacgaaaccgtcgtcgagcgcgtgcccatcgtcgcgaacctgcgtcatcacgacatc
gaaccgttcttcaacgagcaggtgctgcacgaccattccggcggccccgacttcgaatgg
aagcgcgagctcacgctgctgtgggacctcgccaacgtcctcgaggccggccgcggcaag
gccgaggacaaccgcaaccagatcgacttcaacttctacgtcgactggcagacgcacacc
gaggacggcgccggctacgtcacgatctcgcagaggaagcgcggttcgccgctcgacaag
ctggtcgccgagatgatgatcctggcgaactccacctggggcaagctgctcgacgaagcc
ggcgttccgggcctgtaccgcgtgcagagcggcggcaaggtgcgcatgtccaccgcagcc
ggcccgcacgacggcctcggcgtggactgctacgcgtggtccagttcgccgctgcgccgt
tatgtcgacatgatcaaccagtggcagatcgtctccgtgctgcgcgacgaagcgcccgcg
ttcgcgccgaaatcggccgacctgatggcggcgctgcgcgacttcgacgtcacctacgcc
gcctacgccgacttccagcgccagatggaacgctactggtgcctgcgctggctgcgccag
caacccggtgtcgccgtcgacggcaaggtgctgcgcgacaacctcgtgcgcctcgacgcg
atcccgctgatggtcaaggtgccctcgctgccggtcatgctgccgggcacgcacgtgcgc
ctgacggtcgaacacagcgacctgctcgacgtcgatatcagcgcgcgcttcgtcacgatg
ctggccgagcccgacccccgggaagccgcggacgcggccctcgagggcaactga
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