Azoarcus sp. DN11: CDA09_20385
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Entry
CDA09_20385 CDS
T05691
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
azd
Azoarcus sp. DN11
Pathway
azd00521
Streptomycin biosynthesis
azd00523
Polyketide sugar unit biosynthesis
azd00541
Biosynthesis of various nucleotide sugars
azd01100
Metabolic pathways
azd01110
Biosynthesis of secondary metabolites
azd01250
Biosynthesis of nucleotide sugars
Module
azd_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CDA09_20385 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDA09_20385 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDA09_20385 (rfbC)
Enzymes [BR:
azd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CDA09_20385 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AYH45710
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All DBs
Position
complement(4396165..4396710)
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AA seq
181 aa
AA seq
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MQALPTAIPDVLIIEPKVFGDARGFFFESFNARVFRDATGLDEAFVQDNHSRSARGVLRG
LHYQIRQPQGKLVRVVRGAVFDVAVDLRRRSPTFGRWTGTELTEDNHRQLWIPPGFAHGF
VVLSESADFLYKTTDYYAPEHERCLAWNDPSVGVEWPLASEPQLSAKDREGKPLAECEVF
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccctcccgaccgccatccccgacgtcctgatcatcgaaccgaaggtgttcggc
gacgcgcgcggcttcttcttcgagagcttcaacgcccgcgtcttccgcgacgcaaccggt
ctcgacgaagcgttcgtgcaggacaaccactcgcgctcggcccgtggcgtgttgcgcggc
ctgcattaccagatccgccagccgcagggcaaactcgtgcgcgtcgtgcggggcgcggtg
ttcgacgtcgccgtcgacctgcgccgccgttcgccgactttcggtcgctggacgggcacc
gaactcaccgaggacaaccaccgccagctgtggatcccgcccggcttcgcgcacggcttc
gtcgtgctgtccgaatctgcggacttcctctacaagaccaccgactactacgcgccggaa
cacgaacgctgcctcgcctggaacgacccctccgtcggcgtcgagtggccgctcgcgagc
gaaccgcaactgtcggcgaaagaccgcgagggcaaacccctcgccgaatgcgaggtattc
gaatga
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