Arthrobacter zhangbolii: MUK71_06050
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Entry
MUK71_06050 CDS
T08979
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
azh
Arthrobacter zhangbolii
Pathway
azh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUK71_06050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azh03019
]
MUK71_06050
Messenger RNA biogenesis [BR:
azh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MUK71_06050
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF459
BRK
Motif
Other DBs
NCBI-ProteinID:
UON93177
UniProt:
A0A9X1M7Z6
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Position
1302290..1303981
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AA seq
563 aa
AA seq
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MSVTPGSALLTPPALEPGTLRIVALGGLGEIGRNMAVFEIDGKLLIVDCGVLFPEETQPG
VDLILPDFSYIEDRLEDVVGVVLTHGHEDHIGAVPYLLRLKNDIPLIGSQLTLALVEAKL
QEHRIKPFTLTVREGQVEHLGPFECEFVAVNHSIPDALAVFIRTEAGTVLHTGDFKMDQL
PLDGRITDLRAFARLGEEGVDLFMADSTNADVPGFTTAEREIGPVLNELFGKVSKRIIVA
SFSSHIHRVQQVLDAAAAHGRYVCFVGRSMVRNMAIAEKLGYLNVPEGILVDLKNVDDLP
DDKVVLMSTGSQGEPMAALSRMANGDHRISIGKGDTVILASSLIPGNENAVFRVINGLMR
LGADVVHKGNAKIHVSGHAAAGELLYCYNILRPKNAMPVHGETRHLIANGRLAAATGVPE
QNIILADDGTVVDLRGGKARVVGEVECGFVYVDGSSVGAITDTDLKDRRILSEEGFISII
SVVNRSTGTIVSGPEIHARGFAEGDAVFDEIIPKISAALEEAVRSNTDHTTYQLQQVVRR
VVGTWVNRRLRRRPMIVPVVVEA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaccccgggcagcgcgctgctcaccccgccggccctagagcccggaaccctg
cggatcgtcgccctgggcggactgggggagatcggccggaacatggccgtgttcgagatc
gacggcaagctcctgatcgttgactgcggcgtgctgttcccggaggaaacccaacccgga
gtcgacctcatccttccggacttctcctacatcgaggaccgcctggaggatgtggtgggc
gtggtgctcacgcacggccacgaggaccacatcggtgccgtgccgtacctgctgcgcctg
aagaatgacattcccctgatcggttcgcagctgaccctggccctggtcgaagccaagctc
caggaacaccgcatcaagcccttcaccctcaccgtcagggaagggcaggtggaacacctc
ggtcccttcgaatgcgaattcgtggccgtcaaccactccatccccgacgccctggccgtg
ttcatccgcaccgaggccggcaccgtgctgcacaccggcgacttcaagatggaccagctg
ccgctggacggccggatcaccgacctgcgcgccttcgcccggctcggcgaggaaggcgtg
gacctgttcatggcggactccaccaacgccgacgtccccggcttcaccaccgccgaacgc
gaaatcggccccgtgctgaacgagctcttcggcaaggtcagcaagcggatcatcgttgcc
tccttctcctcccacatccaccgtgtgcagcaggtcctcgacgcggccgcggcccacgga
cgctacgtatgctttgtgggccgttccatggtccgcaacatggccattgccgagaaactg
ggctacctgaacgtgcccgagggcatcctggtggacctgaagaacgtggatgacctgcct
gatgacaaggtggtgctgatgtccaccggctcgcagggcgaacccatggccgccctgtcc
cggatggccaacggcgaccaccggatcagcatcggcaagggagacacggtcatccttgcc
tcatccctgatcccgggcaatgagaacgccgtcttccgggtcatcaacggactgatgcgc
ctgggcgccgatgttgtgcacaagggcaacgcgaagatccacgtctccgggcacgccgca
gcgggggaactgctctactgctacaacatcctgcggcccaaaaacgccatgccggtccac
ggcgaaacccggcacctgattgccaacgggcggcttgccgctgccaccggcgtgccggaa
cagaacatcatcctggccgacgatggcactgtggtggacctgcgcgggggcaaggcccgc
gtggttggcgaggttgaatgcggattcgtctatgtggacggctccagcgtcggcgccatc
accgatacggacctgaaggaccggcggatcctgagcgaggaaggattcatctccatcatt
tccgtggtgaaccgcagcaccgggaccatcgtctccggtcctgagatccacgcgcgcggg
ttcgctgaaggggacgcggtcttcgacgagatcattcccaagatcagtgcggcactggag
gaagcggtgcggtccaacaccgaccacaccacctaccagctccagcaggtggtgcggcgg
gtagtcggcacctgggtcaaccgccggctgcgccgccggccgatgattgtgccggtagtc
gtcgaggcctga
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