Arthrobacter zhangbolii: MUK71_10805
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Entry
MUK71_10805 CDS
T08979
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
azh
Arthrobacter zhangbolii
Brite
KEGG Orthology (KO) [BR:
azh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azh03016
]
MUK71_10805
Enzymes [BR:
azh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MUK71_10805
Transfer RNA biogenesis [BR:
azh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MUK71_10805
Prokaryotic type
tRNA splicing ligases
MUK71_10805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UON91107
UniProt:
A0A9X1MAH3
LinkDB
All DBs
Position
complement(2325638..2326810)
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AA seq
390 aa
AA seq
DB search
MEQRISEKYLNFASVIDEATLAQNRLTAQMPFIYPHLASMPDAHLGKGAAVGSVIPALGA
VVPAAVGVDIGCGMIAVRTGHRASDIAGLDHRKLREAIERAVPLSAGHNNKVLTASAGTR
TGELADDAAAAGFDPAAYLRDWRLQLGSLGSGNHFIEVSLDEEESVWLFLHSGSRGVGNK
IAQRHIKAAQTYCTGRSIKLPDRDLAYLEEGTPEFDRYIAELMWAQKFALLNREEMMDRV
LACFGAWTGERVLERERINCHHNYTEVEEHYGRKVWLSRKGAIDASPGRAGLIPGSMGTA
SYVVEGKGYAPSLNSAPHGAGRQFSRTRARRTFSRDQLRQAMAGIEYRDTAAFIDEIPAA
YKDIDTVMADAKDLVSVRHVLRQIVNVKGD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagaatcagcgaaaagtacctgaactttgccagtgtcattgacgaggcaacg
ctggcacagaacaggctgaccgcgcagatgccgtttatctatccgcacctggcctccatg
ccggacgcgcatctgggcaagggcgcggccgtgggatccgttatccctgcactgggtgct
gtcgttccggccgccgtcggcgtcgatatcggctgcggcatgatcgcggtccggaccgga
caccgggcttcggacatagcgggcctggaccaccggaaactgcgggaggccattgaacgg
gccgttccgctttccgccggacataacaacaaggtcctcaccgcatccgccgggacccgg
acaggggaactggccgacgacgccgccgcggccgggtttgatcctgcagcttatctccgg
gactggcgcctgcagcttggcagcctcggctccggcaaccacttcatcgaggtatccctg
gacgaggaagagtcggtctggctgttcctgcactcgggatcccgcggggtgggaaacaaa
atcgcacagcggcacatcaaggctgcacagacctactgcaccggacgctccattaagctg
cccgaccgggaccttgcctacctggaggaaggcaccccggagtttgaccgctacatagcg
gaactgatgtgggcgcagaaattcgccctcctgaaccgggaggaaatgatggaccgcgtc
ctggcgtgcttcggtgcgtggacgggggagcgggtgctggaacgggagcggatcaactgc
caccacaattacacggaagtggaagaacactacggcaggaaggtctggctctcacgcaag
ggcgccattgacgcctcgcccggccgtgccggcctgatccccggttccatgggcacggcg
tcgtacgtggtggaaggcaagggctatgctccgtccctgaactcggccccgcacggagca
ggccggcagttttcgcgcacccgggcgcgcaggacgttcagccgggaccagctgcggcag
gccatggccggcattgaataccgtgacactgccgccttcattgacgaaatcccggctgcg
tacaaggacatcgacacggtgatggcggatgcgaaggacctggtgtcggtgcggcacgtg
ctgcggcagatcgtgaacgtaaaaggcgactag
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