Arthrobacter zhangbolii: MUK71_13035
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Entry
MUK71_13035 CDS
T08979
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
azh
Arthrobacter zhangbolii
Pathway
azh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUK71_13035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azh03019
]
MUK71_13035
03009 Ribosome biogenesis [BR:
azh03009
]
MUK71_13035
Enzymes [BR:
azh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUK71_13035
Messenger RNA biogenesis [BR:
azh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUK71_13035
Ribosome biogenesis [BR:
azh03009
]
Prokaryotic type
rRNA helicases
MUK71_13035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
DUF5817_CT
UvrA_inter
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UON93710
LinkDB
All DBs
Position
complement(2807177..2809000)
Genome browser
AA seq
607 aa
AA seq
DB search
MFSDFGLDERVLAALKDVGYVKPSPIQAATLPLLLEGRDVVGLAQTGTGKTAAFAVPALS
LLAGRPATKDTQVLVLAPTRELALQSAEAFTSYATHMDGITVLPVYGGSAYGPQLAGLRR
GAQVVVGTPGRVIDHIAKGSLDLSNLEYLVLDEADEMLRMGFAEDVEQILSSTPAEKQVA
LFSATMPPAIRKIAKKYLNNAAEITVKSKTTTGANTRQRYVQVMGPHKLDAMTRILETED
FDGVIAFVRTKAATEDLADKLKDRGYSAAAINGDIPQQQRERTVEALRDGKIDILVATDV
AARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRTGDAILFMTPREKYLLRAIEKAT
RQPVEHMQLPSVDVVNEKRLAKFSEKITETLASEDVSIFSDLVTKYIAEHDVPAEKVAAA
LAVMAQGGRPLLLQEIPQAPARQRERSEGRGDGFGSRGPTRPLTEGNATYRIAVGRRQRV
LPGSIVGAIANEGGLSSAQIGGIDIRADHTLVELPADLSKDQLRALSRTRIGGELIHLEL
DKGRKPSREREGGSFNDRADRGFKKDFKKRDGERSFGDRGSDRPYKKREGGFRDSAGTGA
RKPRFRD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ctgttcagcgacttcggactggacgagcgcgtcctggcagccctgaaggatgtcggctac
gtcaagccgtcccccatccaggcagctacccttcccctgctgctcgaaggccgcgacgtc
gtgggcctggcacagaccggtaccggcaagaccgccgccttcgcggttcccgcactgtcc
ctgctggccggccggccggcgaccaaggacacccaggtcctggtgctcgcaccgacccgt
gagcttgccctgcagtccgcggaagccttcacttcctacgccacgcacatggacggcatc
accgtgctgcctgtttacggcggttccgcctacggcccccagctcgccggcctgcgccgc
ggcgcccaggttgtagtgggtacccccggccgcgtgatcgaccacattgccaagggttcc
cttgacctgtccaacctcgagtacctggtgctggacgaggccgacgagatgctgcgcatg
ggcttcgccgaagacgtggagcagatcctgtcctccactccggccgagaagcaggttgcc
ctcttctccgccaccatgcccccggccatccgcaagattgccaagaagtacctgaacaac
gctgcggaaatcacggtcaagtccaagaccaccaccggtgccaacacgcgtcagcgctac
gtgcaggtcatgggcccgcacaagctcgatgccatgacccgcatcctggagaccgaagac
tttgacggtgtcattgcattcgtccggaccaaggctgccaccgaggacctggccgacaag
ctgaaggaccgcggctacagcgccgccgccatcaacggcgacatcccgcagcagcagcgc
gaacgtacggtcgaggcactgcgtgacggcaagatcgacatcctggttgccacggatgtt
gccgcccgcggcctcgacgtggagcgcatcagccacgtcgtcaactacgacatcccgcat
gacaccgagtcctacgtgcaccgcatcggccgtaccggccgcgccggccgcaccggcgac
gcgatcctgttcatgaccccgcgcgagaagtacctgctgcgtgccattgaaaaggccacc
cgccagccggtagagcacatgcagctgcccagcgttgacgtggtcaacgagaagcgcctg
gcgaagttctctgagaagatcaccgaaaccctcgcctccgaggacgtttccatcttcagc
gacctggtcaccaagtacatcgccgagcacgatgttcccgcggaaaaggttgccgcagcc
ctggccgttatggcccagggtgggcgtccgctgctgctgcaggaaatcccgcaggctccg
gcccgccagcgcgaacggtccgaaggccggggcgacggcttcggctcacgcggcccgacg
cgcccgctgaccgaaggcaacgccacttaccggatcgccgtcggacgccgccagcgtgtg
ctgcccggctcgatcgtgggtgccatcgccaatgagggcggcctgtcctcggcccagatc
ggcggcattgatatccgtgccgaccacaccctggtggaactgcccgcggacctgtccaag
gaccagctgcgtgccctgtcccgcacccggatcggcggcgagctgatccacttggaactg
gacaagggacgcaagccctcgcgtgaacgcgaaggtggaagcttcaacgaccgtgccgac
cgcgggttcaagaaggacttcaagaagcgcgacggcgagcggtccttcggtgaccgcggc
agcgaccgcccgtacaagaagcgtgaaggcggattccgcgacagcgccggtaccggtgcc
cgcaagccccgtttccgcgactag
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