Azoarcus sp. CIB: AzCIB_0156
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Entry
AzCIB_0156 CDS
T04019
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
azi
Azoarcus sp. CIB
Pathway
azi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AzCIB_0156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azi03400
]
AzCIB_0156
Enzymes [BR:
azi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AzCIB_0156
DNA repair and recombination proteins [BR:
azi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AzCIB_0156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AKU10061
LinkDB
All DBs
Position
190471..194043
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AA seq
1190 aa
AA seq
DB search
MEHEVVGASDLAGGLMVIHGNHPEALRDVLVAWMKRHPLAPLENELILVQSNGIAQWLKM
ALAADEAAGGCGIAAALDAFLPSRFVWQAYRAVLGGEAVPEVSPFDKPLLVWRLMRLLPS
LLAREAFAPLARFLSDDEDLRKRHQLAERLADLFDQYQMYRADWLAAWAAGEDVLLTARG
GREALPAAQAWQPALWRALLADVGPALAGSGRAAVHTRFLAAVAALGDAPRPPALPRRVM
VFGISSLPAQTLEVLAAIARWSQVLLCVHNPCEHYWADIVADKDLLRATGSRHARRAGMP
AVLADEELHLHAHPLLAAWGKQGRDFIGLLDEHDAGEARDRCARRFAEVGTRIDLFESHG
EGCLLHQLQDDIRDLRPLAETRARWPAVDPATDASIRFHVAHGPQREVEILHDQLLAAFN
ADASLRPRDVIVMVPDIDAYAPHIQAVFGLLDADDPRFIPFTVADQGLRHHDPLLNAVEK
LLGLPQSRVAVSDVLDLLDVPALRARFSIAEDDLPLLHRWVRGANIRWGLHAEQRASLGL
PAGAERNSWLFGLRRMLLGYAVGGAGDADEAWQGIEPYDEIGGLDAGLVGPLATLLERLD
AAWRDLRETATVEDWCRRLRGLLADFFDPADASGAYTLQRLESALQRWQDACAAAGLVEV
LPLSVVREHWLAQMDDSGLSQRFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDYPRTRVP
MDFDLMGRDYRPGDRSRREDDRYLFLEALLSARERLHVSWVGRSIHDNTARPPSVLVGQL
RDHLAAGWRLVGHDGEDAEEGLLAALTVEHRLQPFSPDYFPVDGTGSPLFTYAREWHDGP
HRGEGLAADAAPLAPLDESEPLTLRELADFLKEPAKVFLRRRLGVYFELPDPSSEDHEPF
ALDALQNWQLQDELIAAQLDALGRGEEREAALERALARIERRGELAPGHFAALMQAELAE
PMESLFERYAKALADWPEAVEPDEDVAFEHSVGGARLVVADRLGGLRRGADGRRGRVVLE
RSGLVTKDKRYRRDKLLRHWIAHVAGHLAGAPMTSLVVGKVGDAPIDALDVDAARGWFGS
LLDAWHAGLARPLPLAAKTAFAWLDKGGRADTPRDGDAGRAARLAYEGDGFKLRGEIEDS
PYLARAWPDFDALWADGEFARLADTLLRPVYQGIGTPKDYKLGLAKGAEA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgaggtcgtaggggcgagcgatctggcgggcgggctgatggtgatccacggc
aaccacccggaggcgctgcgcgacgtgctggtcgcgtggatgaagcgccatccgctggcg
ccgctggaaaacgagctgatcctcgtgcagagcaacggcattgcgcagtggctgaagatg
gcgctggcggcggacgaggcggcgggcggctgcggcatcgccgcggcgctggacgccttc
ctgccctcgcgcttcgtgtggcaggcctaccgcgcggtgctgggcggcgaggcggtgccg
gaggtgtcgcccttcgacaaacccttgctggtctggcggttgatgcgcctcttgccgtcc
ttgctcgcgcgcgaggcgttcgcgccgctcgcgcgcttcctctcggacgacgaggatctg
aggaagcgccaccagctcgccgagcgcctcgccgatctcttcgaccagtaccagatgtac
cgcgccgactggctcgcggcctgggcggcgggcgaggacgtgctgctcacggcgcgcggc
gggcgcgaagccttgccggccgcacaagcctggcagccggcgctgtggcgcgcgctgctg
gcggacgtcggcccggcgctcgcgggcagcggccgcgcggcggtgcatacgcgcttcctc
gcggcggttgccgcgctgggggacgcgccgcgcccgcccgcgctgccgcgccgcgtgatg
gtgttcggcatctcgtcgctgccggcgcagacgctggaagtgctggcggcgatcgcgcgg
tggagccaggtgctgctgtgcgtgcataacccgtgcgagcactactgggccgacatcgtc
gcggacaaggatctgctgcgcgcgaccggctcgcgccatgcgcgccgagccggcatgccg
gcggtgctggcggacgaggagctgcacctgcacgcccatccgctgctcgcggcgtggggc
aagcagggacgcgacttcatcggcctgctcgacgagcacgatgcgggcgaggcgcgcgac
cgctgcgcgcgccgtttcgccgaggtcggcacgcgcatcgacctcttcgagtcccatggc
gagggctgcctgctgcaccaactgcaggacgacatccgcgacctgcgcccgctcgccgag
acgcgcgcgcgctggccggcggtggatcccgcgacggatgcgtcgatccgcttccacgtc
gcgcacggtccgcagcgcgaggtcgagatcctgcacgaccagctgctcgcggccttcaat
gccgacgccagcctgcgcccgcgcgatgtgatcgtgatggtgccggatatcgacgcctac
gcgccgcacatccaggcggtgttcgggctgctcgacgccgacgacccgcgcttcatcccc
ttcacggtcgccgaccaggggctgcgccaccacgatccgctgttgaacgcggtcgagaag
ctgctgggcctgccgcagtcgcgcgtggcggtgtccgacgtgctcgatctccttgacgtg
ccggcgctgcgcgcgcgcttcagtattgcggaggatgacctgccgctgctgcaccgctgg
gtgcgcggcgcgaacatccgctggggcctgcacgcggagcagcgcgcgagtctcggcctg
cccgcaggggcggagcggaactcgtggctgttcgggctgcgccgcatgctgctcggctat
gcggtgggcggtgcgggcgatgcggatgaggcctggcaaggcatcgagccctacgatgag
atcggcggcctcgatgcgggcttggtcgggccgctcgcgacgctgctggagcgcctcgac
gcggcctggcgggacctgcgcgagacggcgacggtggaggactggtgccggcgtctgcgc
ggcctgctcgcggacttcttcgatcccgccgacgcgagcggggcctacacgctgcagcgg
ctcgaatcggcgctgcagcggtggcaggacgcctgcgccgcggcggggctcgtcgaggtg
ctgccgctgtcggtggtacgcgaacactggctcgcgcagatggacgactcgggcctgtcg
cagcgcttcttcgccggcgcggtgaccttcgcgacgctgatgccgatgcgcgcgatcccc
ttccgccacgtgtgccttttgggcatgaacgacggcgactacccgcgcacgcgcgtgccg
atggatttcgacctgatggggcgcgactaccgccccggcgaccgttcgcgccgcgaggac
gaccgctacctgttcctggaagcgctgctgtcggcgcgcgagcggctgcacgtgagctgg
gtcgggcgcagcatccacgacaacaccgcgcgtccgccctcggtgctggtcgggcagctg
cgcgaccacctcgcggccggctggcggctcgtggggcacgacggcgaggatgcggaggag
gggctcctcgccgcgctcaccgtcgagcaccgcctgcagcccttcagcccggattacttc
ccggtcgacggcaccggctcgccgctgtttacgtatgcgcgcgagtggcacgatgggcct
catcgaggcgagggtctcgcggccgatgccgcgccgctggcgccgctcgacgagagcgag
ccgctgacgctgcgcgagctcgccgacttcctcaaggagcccgcgaaggtcttcctgcgc
cggcgcctgggggtgtatttcgagctgcccgacccgtccagcgaggaccatgaacccttt
gcgctcgacgcgctgcagaactggcagctgcaggacgagctgatcgctgcccagctggat
gcgctgggccgcggcgaggagcgcgaggcggcgctggagcgggcgctcgcgcgcatcgaa
cggcgcggcgagctcgcgccggggcactttgcggcgctgatgcaggccgagctcgccgag
ccgatggagagcctcttcgaacgctatgcgaaggcgctcgcggactggcccgaggcggtc
gagccggacgaggacgtcgcgttcgaacactcggtcggcggcgcgcggctcgtcgtcgcg
gaccgtctcggcggcctgcgccgcggcgcggacggccggcgtggccgcgtcgtgctggaa
cgcagcgggctggtcacgaaggacaagagataccggcgcgacaagctgctgcgccactgg
atcgcgcacgtcgcgggccacctcgcgggggcgccgatgaccagcctcgtcgtcggcaag
gtcggcgatgcgccgatcgatgcgctcgacgtcgacgccgcgcgcggctggttcggcagc
ctgctcgacgcctggcacgcgggcctcgcgcggccgctgccgctggccgcgaagacggcc
ttcgcgtggctcgacaagggcggccgggccgatacgccgcgcgacggcgatgccggtcgt
gccgcgcggctcgcgtacgaaggggatggcttcaagctgcgcggcgagatcgaggacagc
ccgtacctcgcgcgcgcctggccggacttcgacgcgctgtgggccgacggcgaattcgcg
cgtctcgccgacacgctgctgcggccggtctatcaggggatcggcacgcccaaggactac
aagctgggcctcgcgaaaggggccgaggcatga
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