Azoarcus sp. CIB: AzCIB_1080
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Entry
AzCIB_1080 CDS
T04019
Name
(GenBank) GAF modulated sigma-54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
azi
Azoarcus sp. CIB
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
azi03000
]
AzCIB_1080
Transcription factors [BR:
azi03000
]
Prokaryotic type
Helix-turn-helix
Other families
AzCIB_1080
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GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
GAF
Sigma54_activ_2
AAA_16
AAA
PAS_7
AAA_22
TsaE
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AKU10985
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Position
complement(1220898..1222595)
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AA seq
565 aa
AA seq
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MTTAPHHARPAAAKTPLLARLDADGMIHASSLPMMEASPPRSRPEPLIASWQRSREHGLR
PDEPLNDTALAPGELTDRIAANNRLLAFSRPMIEGLYRQIGSPSSTVLLADRQGMILSAL
GHTDFLDRASRVALRPGVDWSEATMGTNAIGTALHSGTVVTVHGDQHYLARNRIFTCVAT
PILAPTGGMLGILDVSSDARENLTHAEALLRTTAELIEHRLLETLDDGFLTLHFHTRRDA
LADPLHALVVFDEGGRLVASNRKARGMLGLDASHPATTYEACFATPWSSLVGWAAQAPDA
PFPLYDLKGRTLIARANLRSRRHVDTGPRSATTRHDDSRLGAIGRGDGRIARIVGTLRNC
AAEATPLLIEGEMGTGKAHLVRAFHEDHKPTADAPLIGIDCAALPAGEAAEAELDRAWVQ
AANGILFLVEIDALPTTLQARLFDAHDGSRARVIGAARRPLAELRREGRLDLRNFEAASG
RIISLPPLRERDDFDELVRHFVREAAAGRPVYVCPDALALLHRHRWPGNLRELRNQLRLM
LALMGDEASQLCPEDIPPELFENAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacggcgccgcaccacgcacgccccgctgccgcaaaaacccctttactcgcgcgg
ctcgacgccgacggaatgattcatgcttcatcgctccccatgatggaagcttcacccccc
agatcccgaccggaaccgctcatcgcatcgtggcagcgcagccgcgagcacggcctgcgt
ccggacgaaccgctcaacgacacggcgctcgcgccgggcgaactcacggaccgcatcgcg
gcaaacaaccggctgctcgcgttttcgcgcccgatgatcgaaggcctgtatcgccagatc
ggcagcccctcatccacggtgctgctggccgaccgccagggcatgatcctcagcgcgctg
ggccacaccgacttcctcgaccgcgccagccgcgtcgccctgcggcccggcgtcgactgg
agcgaggccacgatgggcaccaacgcgatcggcacggcgctgcactccgggacggtcgtc
acggtgcacggcgatcagcactacctcgcacgcaaccgcatcttcacctgcgtcgccaca
cccatcctcgcacccaccggcggcatgctcggcatcctcgacgtgtcgtcggatgcgcgc
gaaaacctcacgcacgccgaagcgctgctgcgcacaacggccgaactgatcgagcaccgc
ctgctggaaacgctggacgacggcttcctcacgctgcacttccacacgcgccgcgatgcg
ctcgccgacccgctgcatgcgctcgtcgtgttcgacgaaggcggccgcctcgtcgcgagc
aatcgcaaagcgcgcggaatgctcggtctggacgcgtcacatcccgcaacgacctatgaa
gcctgcttcgcgacgccctggagcagcctggtcggctgggcagcgcaggcgcccgacgcg
ccctttccgctctacgacctgaaaggccgcacgctcatcgcccgcgccaacctgcgttcg
cgacgccacgtcgacacgggaccgcgcagcgcaactacccgccacgacgactcccgtctg
ggcgcgatcggccgcggcgacgggcgcatcgcgcgcattgtcggcacgctgcgcaactgc
gccgcggaagccaccccgctgctgatcgaaggcgagatggggaccggcaaggcgcatctc
gtgcgggcgttccacgaagaccacaaaccgaccgcggacgcgccgctgatcggcatcgac
tgtgcggccctgcccgctggcgaagccgcggaggcggaactggaccgcgcctgggtgcag
gcggccaacggcatcctcttcctcgtggagatcgacgcactacccacaacgctgcaggcg
cgactcttcgacgcccacgacggcagccgcgcccgcgtgatcggtgcggcacggcggccg
ctcgccgaactgcgtcgcgaggggcgactcgacctgcgcaatttcgaggcggccagcggc
cggatcatcagcctgccgccgctgcgcgagcgcgacgatttcgacgagctcgtgcgccat
ttcgtgcgcgaggccgccgccgggagaccggtctacgtgtgccccgacgcgcttgcgctg
ctgcaccgccaccgctggccgggcaacctgcgcgagctgcgcaaccaactgcgcctcatg
ctcgcgctgatgggggacgaggccagccagctgtgccccgaggacatcccgccggagctg
ttcgagaacgccgcctga
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