Azoarcus sp. CIB: AzCIB_1930
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Entry
AzCIB_1930 CDS
T04019
Name
(GenBank) peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
azi
Azoarcus sp. CIB
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
azi01002
]
AzCIB_1930
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
azi01011
]
AzCIB_1930
Peptidases and inhibitors [BR:
azi01002
]
Cysteine peptidases
Family C82
AzCIB_1930
Peptidoglycan biosynthesis and degradation proteins [BR:
azi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AzCIB_1930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AKU11825
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All DBs
Position
complement(2157679..2159415)
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AA seq
578 aa
AA seq
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MEIRKTRRPDKGAIVNRAARIGRLIGRVLQLIALALCVAGGSATAGLFGEADGDAVRLAL
RERVITLRTNGDLRPGGGEIAARRLIPDFYASRDYAPVWSSPQQRRALLRAVDDSASHGL
DPADYQFDLLRSHANDGVRDAGRLADRDLLFTEALVRLVYHLRFGKVDPRDLYEGWNFSR
SLGAVEPVQALEALIGAESLGAAIEFYAPRLDAYRQLRAALLAHRAMEVLGGWSSVPAGP
TLRPGDRDLRVPALRERLRGSGDHLQPPPSDRELFDDALRDAVVAFQARHGLEPDGAVGR
KTVAALQVDVGRRIDQIRVNLERLRWIAQDVAGDYLLVNIAGFNARLHLDGKLAWQSRVV
VGRPYRKTPAFRAEMQYLVLNPEWVIPPTILKEDVLPKVARDRAYLAEHDMHVVTNAGRE
IDDRDVDWARYGRGGFPHQIVQAAGPDNPLGRVKFMLPNPYAVYLHDTPAKTLFQRSERA
YSSGCIRLERPMELAVLLLDDPGQWSAEALEAEIAKGETRNVQIGRRVPVMILYHTAEVG
EDGRTYFHPDLYAQDAAVLEALARPFRFSAVGRTGPGG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggagatacggaaaacgaggcgaccggacaagggcgcaatcgtaaaccgggcggcgcgg
attgggcggctgatcgggcgggtgttacaactcatcgcgctggccctgtgcgtggccggc
gggagtgcaactgcgggcctgtttggcgaggctgacggcgacgccgtgcgcctcgcgctg
cgcgaacgcgtcatcacgctgcgcaccaacggcgacctgcgtccggggggcggggagatc
gccgcgcgccgcctgatccccgacttctacgcgagccgcgactacgcgcccgtctggagc
agcccgcagcagcggcgcgcgctgctgcgggcggtggatgacagcgcgagccacggcctc
gatccggccgattaccagttcgatctattgcgtagccacgcgaacgacggtgtgcgggac
gccggcaggctcgcggaccgcgacctgctgttcaccgaggcgctggtgcggctcgtctat
cacctgcgtttcggcaaggtggacccgcgcgacctttacgaaggctggaatttctcgcgt
tcgctaggggcggtcgagccggtgcaggcgctggaagcgctgattggtgccgaatcgctc
ggagcggcaatcgaattttatgcgccgcgcctggatgcctatcgtcagctacgcgcggcc
ctgctcgcgcatcgcgcgatggaggtgctgggcggctggagttcggttccggccggcccg
acgctgcggcccggcgatcgcgacctgcgcgtcccggccctgcgcgagcgtctcaggggg
agcggcgaccatcttcagccgccgccgtccgaccgcgaactcttcgacgatgccttgcgc
gacgcggtggtcgcgtttcaggcacgccacggacttgagccggacggggccgtcggacgc
aagacggtcgctgcgctgcaggtcgacgtgggacgtcgcatcgaccagatccgcgtgaat
ctggaacgcttgcgctggatcgcgcaggacgtcgcgggcgattacctgctcgtgaacatc
gccggcttcaatgcccgcttgcacctggacggaaaactcgcgtggcagtcgcgtgtcgtc
gtcggccgcccctatcgcaagacgccggccttccgcgccgagatgcagtacctcgtcttg
aatccggagtgggtgattccgccgacgatcctgaaggaggacgttctgcccaaggtggcg
cgcgaccgcgcttatctcgctgaacacgacatgcacgtagtgaccaacgctgggcgtgag
atcgatgaccgcgacgtcgactgggcgcgctacggcagaggcggcttcccgcatcagatc
gtgcaggccgcgggaccggacaacccgctcggacgcgtcaagttcatgctacccaatccg
tacgcggtatatctgcacgacaccccggcgaagacgttgttccagcgcagcgaacgcgcc
tacagctcgggctgcatccggctcgagcggccgatggagcttgcggtgctgctgctcgac
gatcccggacagtggagcgcggaggcgctggaggcggagatcgcgaagggcgagacgcgc
aacgtgcagatcgggcgacgggtgccggtgatgatcctgtaccacacggccgaggtgggc
gaggacgggcgcacctatttccaccccgacctgtacgcccaggatgccgcagtactcgaa
gccctcgcgcgcccgttccgcttcagcgcggtcgggcgcaccgggccgggtgggtga
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