Azoarcus sp. CIB: AzCIB_2620
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Entry
AzCIB_2620 CDS
T04019
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
azi
Azoarcus sp. CIB
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azi03016
]
AzCIB_2620
Enzymes [BR:
azi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AzCIB_2620
Transfer RNA biogenesis [BR:
azi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AzCIB_2620
Prokaryotic type
AzCIB_2620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKU12513
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All DBs
Position
complement(2928576..2929505)
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AA seq
309 aa
AA seq
DB search
MKAQKQFRHQRRVLDGVLLLDKPQGITSNAALQTARRLLNAAKAGHTGTLDPMATGLLPL
TFGEATKFSQMLLDADKEYEATVHLGIETDTGDAEGRPIAEAPVSVAENGVRTALERLTG
EIEQIPPMYSALKRDGKPLYEYARAGIEVELMPRRVTIHALELLEFGGETFRIRVACSKG
TYIRTIAIDLGRILGCGAHLSALRRTRIGPFAAGSGTVTLAELEAVPADDRERLLAPADA
LVSHLPEVMLSTLQAGGLLQGRALVYEGRERGLVRVYGEGRFLGLGELGDDGRLLPKRLV
ATGTAAPQS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcgcagaaacaattcaggcaccagcgccgcgtgctggacggcgtcctgctgctc
gacaagccgcagggcatcacgtcaaacgcggcgctgcagacggcgcgccgcctgctcaac
gcggccaaggccgggcacaccggtacgctcgatccgatggcgacggggctgttgccgctg
accttcggggaggcgacgaagttctcgcagatgctcctcgacgccgacaaggaatacgag
gcgacggttcatctgggcatcgagacggataccggtgatgccgaagggcgtccgatcgcc
gaagcgccggtgtcggtcgcggaaaacggcgtccgtaccgcgctggagcgcctaaccggc
gagatcgagcagatcccgccgatgtactcggcactcaagcgcgacggcaagcccctgtac
gaatatgcgcgcgccggcatcgaagtcgagctgatgccgcgccgcgtcacgattcacgcg
cttgagttgctggaattcggtggggaaacctttcgtatccgggttgcatgcagcaagggc
acctacatccggacgattgcgatcgatctcggtcggattctcggttgcggggcgcatctc
tcggcgctgcgacgcacgcgcatcggcccgttcgcagccgggtcgggcacggtgacgctc
gcagaactcgaagccgtgccggctgacgaccgggaacgcttgctcgcacccgccgatgcg
ctggtgtcgcaccttcccgaggtcatgctctccaccttgcaggcgggcggtttgctgcag
gggcgtgcgttggtttacgagggccgcgagcggggtcttgtcagagtttacggcgaaggg
cgctttctgggcctgggggaactgggcgatgacggccgcctgttgcccaaacgcctcgtt
gcaacgggtacggcagcaccgcagtcttga
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