Azoarcus sp. CIB: AzCIB_2623
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Entry
AzCIB_2623 CDS
T04019
Name
(GenBank) transcription elongation factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
azi
Azoarcus sp. CIB
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azi03021
]
AzCIB_2623
03009 Ribosome biogenesis [BR:
azi03009
]
AzCIB_2623
Transcription machinery [BR:
azi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AzCIB_2623
Ribosome biogenesis [BR:
azi03009
]
Prokaryotic type
rRNA transcription factors
AzCIB_2623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
DUF5830
KH_KhpA-B
Eap1
Motif
Other DBs
NCBI-ProteinID:
AKU12516
LinkDB
All DBs
Position
complement(2932735..2934210)
Genome browser
AA seq
491 aa
AA seq
DB search
MSREILLLVDALAREKNVAKDIVFGALETALASATKKRINDEADVRVTIDRETGDYESFR
RWVVLPDEEVVNDEAEMGIIDAREVESGIQVGEYIEEPLEAIDFGRIGAQAAKQVILQRI
RDAEREQVLNDFLDRKEHLVSGTIKRMERGNAIIEVGRLEAMIPRDQMIPRENLRVGDRV
KAFLLRIDRGARGPQLILSRTAAEFLGKLFELEVPEIEDGLLAIKACARDPGLRAKIAVQ
SNDARIDPIGTCVGLRGSRVTAVRNEIAGEQIDIIVWSQDPAQFVISALQPAEVVSIVVD
EDSHSMDVVVDDNNLAIAIGRNGQNVKLASELTGWTINLMSEEESAQKSGQERQSLRQLF
MDKLDVDEELADILIDEGFSSLEEIAYVPLAEMLEIEAFDEETVNELRNRARNVLLTEAI
VTEEQLENVSDDLINLDGMDKPLAAKLAEHGVRTRDDLADLAVDELVEIAGIEQERASTL
ISIARAHWFEE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgagattttgctgcttgtcgatgcgctggcgcgcgaaaagaatgtagccaag
gacatcgtgttcggtgccctggaaacggcgctcgcctccgcgacgaaaaaacgcatcaat
gacgaagccgatgtgcgcgtgacgatcgaccgcgagaccggtgattacgaatcctttcgc
cgctgggtcgtgctgccggacgaagaggtcgtcaacgacgaggccgagatgggcatcatc
gatgcccgcgaagtcgagtccggcatccaggtcggcgaatacatcgaggagccgctcgag
gcgatcgatttcggtcgtatcggtgcccaggcggccaagcaggtgatcctgcagcgcatt
cgcgacgccgagcgcgagcaggtgctcaacgacttcctcgatcgcaaggaacatctcgtt
tcaggcactatcaagcgcatggagcgcggcaacgcgatcatcgaagtgggtcgcctcgaa
gccatgattccgcgtgatcagatgatcccgcgcgagaacctgcgcgtcggcgaccgcgtc
aaggctttcctgctgcgcatcgaccgtggagctcgtggcccccagttgatcctgtcgcgc
acggctgcggaatttctcggcaagctgttcgaactcgaagtgccggaaatcgaggatggc
ctccttgcaatcaaggcttgtgcccgtgaccccggcctgcgtgcgaaaatcgccgtgcag
tcgaacgacgcgcgcatcgatccgatcggcacctgcgtcggtctgcgcggctcgcgcgtc
accgcggtgcgcaacgagattgcaggcgagcagatcgacatcatcgtgtggtcgcaggat
cccgcccagttcgtgatctccgcgctgcagccggcggaggtcgtgtccatcgtcgtggat
gaggacagccacagcatggacgtcgtcgtcgacgacaataatctcgcgatcgcgatcggt
cgcaacggccagaacgtcaagctcgcgtccgagctcacgggctggacgatcaacctgatg
agcgaagaggagtctgcgcagaagtccgggcaggagcgccagagcctgcgccagctcttc
atggacaagctcgatgtcgacgaggaactcgccgacatcctgatcgacgaaggtttttcg
tcgcttgaggaaattgcgtacgtgccgctcgccgaaatgctcgaaatcgaagccttcgat
gaagagacggtcaatgagctgcgcaaccgtgcgcgcaacgtcctgcttaccgaggccatc
gtgaccgaggagcagctggaaaatgtttccgacgatctgatcaatctcgacgggatggac
aagccgctcgctgccaagctggccgagcatggcgtacgcacccgcgacgatctggccgat
ctcgcagtcgatgagctggtcgaaatcgccggaatcgaacaagaacgtgccagcacgctg
atttcgatcgcgcgcgcgcattggttcgaagaatga
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