Azoarcus sp. CIB: AzCIB_2813
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Entry
AzCIB_2813 CDS
T04019
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
azi
Azoarcus sp. CIB
Pathway
azi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AzCIB_2813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azi03400
]
AzCIB_2813
DNA repair and recombination proteins [BR:
azi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AzCIB_2813
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AzCIB_2813
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
UB2H
HH_RND_rel
FlaG
Motif
Other DBs
NCBI-ProteinID:
AKU12706
LinkDB
All DBs
Position
complement(3149650..3151707)
Genome browser
AA seq
685 aa
AA seq
DB search
MTSSTDSVPVVTFEGSPFRLHQPFAPAGDQPAAIDLLTEGVSDGLMFQTLLGVTGSGKTY
TMANVIARCGRPALVLAPNKTLAAQLYAEFREFFPENAVEYFVSYYDYYQPEAYVPSRDL
FIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSCIYGIGDPVDYHAMILHLREGERI
AHRDLVQRLVAMQYTRSDIDFRRGTFRVRGDVIDVFPAENAEYAVRIEMFDDEIEHLTLF
DPLTGHLKQKLVRFTVYPSSHYVTPRATVLQAIEAIKDELRDRVSDFQRAGKLVEAQRIE
QRTRFDLEMLNEMGFCKGIENYSRHLSGRGPGEPPPTLIDYLPPDALLFVDESHVAIPQV
GGMYKGDRSRKENLVEYGFRMPSALDNRPLKFEEFERLMPQTIFVSATPANYEATHQAQV
VEQVVRPTGLIDPAVEVRSASTQVDDLLSQAKRRIAVGERVLVTTLTKRMAEDLTDYLAE
NGIRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGF
LRSERSLIQTIGRAARHIHGRAILYADVVTRSMRAAMDETERRRAKQLAFNAEHGIVPKS
VTKRIKDIIDGVYSSSDERNANVAQEARAEYFAMDEKSVAKAIRKLEKEMQEHARNLEFE
KAAAARDELFRLRQRAFGADQHGEA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttcgacggacagtgttccggtggtgactttcgaagggagtccgttcagactc
catcagccttttgcgcccgcgggcgaccagccggcagcgatcgatctgctgaccgagggg
gtgtccgacggcctgatgttccagaccctgctcggcgtgaccggctcgggcaagacctac
acgatggcgaacgtcattgcgcgctgcggccgacccgccctggtgctggcgccgaacaag
acgctagccgcgcagttgtacgccgaattccgggagttctttcccgagaacgccgtcgaa
tattttgtctcgtactacgactactaccagccggaagcctatgttccgtcgcgcgatctc
ttcatcgagaaggattcaagcatcaacgagcacatcgagcagatgcgcctgtcggcaacg
aagagcctgatggagcggcgcgacgtggtgatcgtcgcgacggtgtcgtgcatctacggt
atcggcgacccggtcgattaccatgcgatgatcctgcatctgcgtgagggcgagcgcatt
gcccatcgcgacctcgtgcagcgactcgtggcgatgcagtacacccgctccgacatcgac
ttccggcgcgggaccttccgtgtgcgcggcgacgtgatcgacgtgtttccggcggagaat
gccgagtatgcggtgcggatcgagatgttcgacgacgagatcgagcatctgacgttgttc
gacccccttaccgggcacctgaagcagaagctcgtccgctttaccgtttacccgtccagc
cactacgttactccgcgcgcgacggtgctgcaggcgatcgaggcgatcaaggatgagctg
cgcgatcgagtcagtgattttcagcgcgcgggtaagctggtggaagctcagcgcatcgag
cagcgcacgcgcttcgatctggagatgctcaacgagatggggttctgcaagggcatcgag
aactactcgcgccatttgtcggggcgcggcccaggcgagccgccgccgacgctgatcgac
tatctgccgccggacgcgttgctgttcgtcgatgagtcgcacgtggcgattccgcaggtg
ggcggcatgtacaagggtgaccgttcgcgtaaggagaacctcgtcgaatacggattccgt
atgccgtcggcactcgacaaccggccgctgaagttcgaggaattcgagcgcctgatgccg
cagacgatcttcgtgtccgcgacgcctgcgaattacgaggcgacgcaccaggcgcaagtc
gtcgagcaggtcgtccgccccacggggctgatcgaccccgcggtggaggtcaggtccgca
agcactcaggtcgacgacctgctgtcccaggccaagcgccgtattgccgtgggtgagcgc
gtgctggtaacgacgctgacgaagcggatggcggaggacctcaccgattatcttgccgaa
aacggcattcgcgtgcgttacctgcattccgacatcgacacggtcgagcgtgtcgagatt
atccgcgatctgcgtctcggggagttcgatgtgctggtgggcatcaacctgctgcgcgaa
ggtctggatattcccgaggtgtctcttgtggcgattctggacgcggacaaggaaggtttc
ctgcgttccgagcgctcgctgatccagacgatcgggcgggccgcacggcatatccacggc
cgcgcgatcctatacgcggacgtggtgacgcgctcgatgcgcgccgcgatggacgagacc
gagcgacgtcgggcaaagcagctcgcgttcaacgccgaacacggtatcgtcccgaagtcg
gtgaccaagcgcatcaaggacatcatcgacggcgtctactcgagcagcgacgagcgcaat
gcgaatgtagcgcaggaggcgcgggccgaatatttcgcgatggacgagaagtccgtcgcg
aaggcgatccggaaactcgagaaggaaatgcaggaacatgcccgcaacctcgaattcgaa
aaggctgcagcagcccgggacgaattgttcaggctgcgccagcgcgcgttcggcgcggac
cagcatggggaggcctga
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