Azoarcus sp. CIB: AzCIB_3207
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Entry
AzCIB_3207 CDS
T04019
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
azi
Azoarcus sp. CIB
Pathway
azi03030
DNA replication
azi03430
Mismatch repair
azi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AzCIB_3207
03430 Mismatch repair
AzCIB_3207
03440 Homologous recombination
AzCIB_3207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azi03032
]
AzCIB_3207
03400 DNA repair and recombination proteins [BR:
azi03400
]
AzCIB_3207
Enzymes [BR:
azi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AzCIB_3207
DNA replication proteins [BR:
azi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AzCIB_3207
DNA repair and recombination proteins [BR:
azi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AzCIB_3207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKU13100
LinkDB
All DBs
Position
complement(3593199..3596693)
Genome browser
AA seq
1164 aa
AA seq
DB search
MTASHEPRFIHLRLHSEYSISDGIVQIDQAIARAAADGMPALGISDLANLFGMVKFYKGA
RGKGMKPIIGVDAWITNDTDRDKPFRALLICKNRKGYGQMCELLTRAFLDNKYRGRAEIR
RDWFADGAASDLLCLSGAREGEVGQALANGNVELADRLAAEWAALFPDAYYIELQRAGHA
GAEGYVRQAVQLAGRLGLPVVATHPVQFLKREDFKAHEARVCIAQGYVLADKRRPRDYTE
EQYLKSQDEMCELFADIPEALENSVEIARRCSLTVQLGKNFLPQFPTPEGMTLDDFLVAE
AKAGLEVRLQELYPDEAERERQRPTYEARLRFETDTIIQMGFPGYFLIVADFINWGKQNG
VPVGPGRGSGAGSLVAYSLRITDIDPLAYALLFERFLNPERVSMPDFDIDFCQDNRYRVI
EYVRERYGKDAVSQIVTFGTMASKAVVRDVGRVLDLPYGLCDRLSKLIPIEGAKPVSLAK
AYEMESQIGEMMKDGNDGESVQELWSLAEPLEGLSRNVGMHAGGVLIAPGKLTDFCPLYI
ADGDDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELAVEYVERLTGTKPDLAALPFTD
PAAYQILKDANTTAIFQVESDGMKKLLKKLAPDRFEDIIAVLALYRPGPLGSGMVDDFIL
RKKGQQEIDYFHPDLKPCLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKAD
EMAKHRETIAAGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVVTYHTAWLKAHH
CAAFMAATMSADLDNTDTIKIFFEDSLANGLTILPPDVNQSDYRFVPTDRKTIRYGLGAV
KGVGEPAVRSILDARKKDGPYKDLFDFCARVDRRMVNRRVIEALIRSGAFDTVAPSGTAD
RARLLATVGLAMEAAEQAAANAMQGGLFDLVPEAAGAAPQYVTVRSWTERERLKEEKTAI
GFFLSGHPFNSFREEVRRFIRRPLSQLEPSRDLAMLAGVVMDVRTKMTNRGKMAFVVLDD
GSQVREVSVFSEVFDSNRTKIVTDEVLVVEGKVSNDDFTGGLRIVADKLLSLGEARSRFA
RALQISVNGEVKRAGGAAAAADKLETLLSPFRDGVCPISLHYRNEQAQAELPLGAAWRVR
LDDALLDSLREWLPPESVEILYPS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttctcacgaaccccgcttcatccaccttcgcctgcactccgagtactcgatc
tccgacggcatcgtccagatcgaccaagcgatcgcccgcgcggcggccgacggcatgccg
gcactggggatctccgacctcgccaacctgttcggcatggtcaagttctacaagggcgca
cgcgggaagggcatgaagccgatcatcggcgtcgatgcctggatcaccaacgacaccgat
cgcgacaagcccttccgcgccctgctgatctgcaagaaccgcaagggctacgggcagatg
tgtgagctgctgacccgcgccttcctcgacaacaagtaccgcgggcgtgccgaaattcgc
cgcgactggttcgccgacggcgctgcgtccgacctgctgtgtctgtccggtgcacgcgaa
ggggaagtggggcaggcactggcgaacggcaacgtcgaacttgccgatcggctcgccgcc
gaatgggccgcattgttcccggacgcctactacatcgagttgcagcgcgcaggccatgcg
ggtgcggagggttacgtgcgtcaggccgtgcaactggccggcaggctggggttgccggtg
gtggcgacccaccccgtgcaattcctcaagcgcgaggacttcaaggcccacgaggcgcgc
gtatgcatcgcgcagggttatgtgctggccgacaagcgtcgcccgcgcgactacaccgag
gagcagtacctcaagagtcaggacgagatgtgcgagttgttcgccgacatcccggaggca
cttgagaactccgtcgagatcgcacgccgctgctcgctgacggtgcaactgggcaagaac
ttcctgccgcagttcccgacgccggaagggatgacgctcgacgacttcctcgtcgccgag
gccaaggccggcctcgaagtgcgcctgcaggagctgtatccggacgaagccgaacgcgag
cgccagcgtccgacctacgaggcgcggctcaggttcgagaccgacaccatcatccagatg
ggcttccccggctacttcctgatcgttgcagacttcatcaactggggcaagcagaatggc
gtgccggtcggaccggggcggggctcgggtgcgggctcgctggtggcgtacagcctgcgc
atcaccgacatcgatccgctcgcctacgcgctgctgttcgagcgtttcctgaaccccgag
cgggtgtcgatgcccgacttcgacatcgacttctgccaggacaaccgctatcgcgtcatc
gagtacgtgcgcgagcgctacggcaaggacgcggtcagccagatcgtcaccttcggcacg
atggcctcgaaggccgtcgtgcgagacgtcggccgggtgctcgatctgccctacggcctg
tgcgaccggctctccaagctgattccgatcgaaggcgcgaagcccgtttcgttggcgaag
gcctacgagatggagtcgcagatcggcgagatgatgaaggacggcaacgacggcgagtcg
gtgcaggagctgtggagcctggccgagccgcttgaaggtttgagccgaaacgtcggcatg
cacgctggcggcgtgctgatcgcgccgggcaagctcaccgacttctgtccgttgtacatc
gccgacggggacgacgcgacgcccgtgtcgcagttcgataaggacgacgtggaagccgtc
ggcctcgtgaagttcgacttcctaggcctgcgcaacctcaccatcatcgaactcgcagtc
gagtacgtcgagcggctcaccggcaccaagcccgacctggccgccttgcccttcaccgac
cccgccgcctaccagatcctgaaagacgcgaacaccaccgcgatcttccaggtggaatcg
gacgggatgaagaagctcctcaagaagcttgcccccgaccgtttcgaggacattatcgcg
gtgctggcgctctaccgtccggggccgctcggctcgggcatggtggacgacttcatcctg
cgcaagaaaggtcagcaggagatcgactacttccatccggacctcaagccctgcctcgag
ccgacctacggcgtgatcgtgtatcaagaacaagtgatgcagatctcgcagatcatcggc
ggctacacgctcggcggcgccgacatgctgcgccgcgcgatgggcaagaagaaggccgac
gagatggccaagcaccgcgagaccatcgcggctggcgcgaagcagaagggctacgatccg
gcgctcgccgagcagcttttcgacctgatgacgaagttcgcggagtacggcttcaacaag
tcgcacaccgccgcctacgcggtcgtcacctaccacacggcgtggctcaaggcgcatcac
tgcgcggccttcatggctgcgacgatgtcggcggacctcgacaacacggatacgatcaag
atcttcttcgaggactcgctcgccaacgggctgacgatcttgccgcccgacgtgaaccag
tcggactaccgtttcgtcccgaccgaccgcaagacgatccgctacggtctcggcgcggtg
aagggtgtgggcgagccggccgtgcgctccatcctcgacgcgcgcaagaaagatggaccg
tacaaggatctgttcgatttctgcgcgcgtgtagatcggcgcatggtcaatcggcgcgtg
atcgaggcgctgatccgttcgggcgcattcgataccgtcgcgcccagcggcaccgcagac
cgcgcccgcctgctcgcaaccgtcgggctggcgatggaggccgccgagcaggcggcggcg
aacgcgatgcagggcggcctgttcgatctcgtgccggaggcggccggtgcggcgccccaa
tacgtgaccgtgcgctcgtggacggagcgcgagcggctgaaggaagagaagaccgcgatc
ggcttcttcctttcgggtcatccgttcaacagcttccgcgaggaggtgcgacgtttcatc
cggcgcccgctgtcgcagctcgaaccctcgcgcgacctcgcgatgctggcgggggtggtg
atggacgtgcgcacgaagatgacgaaccgcggcaagatggcctttgtcgtgctcgacgac
ggctctcaggtgcgcgaggtttcggtcttctccgaagtcttcgattcgaaccggaccaag
atcgtcaccgacgaagtgttggtggtcgaaggcaaggtcagcaacgacgacttcacgggc
gggttgcgcatcgtcgccgacaagctgctgtcgctaggcgaggcgcgttcgcgctttgcc
agggcacttcagatcagcgtgaatggcgaagtgaagcgtgcgggcggggctgccgcagcg
gcggataagctcgaaacgctgctctcgccgttccgcgacggcgtctgcccgatctcgctg
cattatcgcaacgaacaggcccaggcggagctgcccctcggcgcggcctggcgtgtgcgc
ctcgacgacgcgctgctcgacagcctgcgcgagtggctgccgcccgaatcggttgagatc
ctgtatccgagctga
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