Azoarcus sp. CIB: AzCIB_3567
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Entry
AzCIB_3567 CDS
T04019
Name
(GenBank) RNA polymerase factor sigma-28 subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
azi
Azoarcus sp. CIB
Pathway
azi02020
Two-component system
azi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AzCIB_3567
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AzCIB_3567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azi03021
]
AzCIB_3567
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
azi02035
]
AzCIB_3567
Transcription machinery [BR:
azi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AzCIB_3567
Bacterial motility proteins [BR:
azi02035
]
Flagellar system
Flagellar assembly proteins
Stator
AzCIB_3567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AKU13460
LinkDB
All DBs
Position
complement(3985687..3986466)
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AA seq
259 aa
AA seq
DB search
MYDAAGNLDKNHLVEAYAPLVKRIAYHLMAKLPASVQMDDLIQNGMMGLLDAISRFEDGL
GAQFETYAVQRIRGAMLDGLRENDWLPRSLRRDMRRIESAVHELEQRNGRQPSEVELAEL
LGMPLVEYQRMLQDARGYQLVHFEDFTDGEGEDYFERHLGAHESNPADILEKADMRNALV
RAIEDLPEREKLMMALYYDEELNLREIGEVLGVSESRVCQLHSQAVARLRSRILGTARPA
GATTGARRGRPPKNPPSGA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcagctggtaatctcgacaagaaccacctcgtggaggcttatgcccccctg
gtcaagcgcatcgcctaccacctgatggcgaagctgccggccagcgtgcagatggatgac
ttgatccagaacggcatgatgggcctgctggatgcgatcagccgtttcgaggatgggctc
ggcgcgcagttcgagacctacgcggtgcagcgcatccgcggcgcgatgctcgacggcctg
cgcgagaacgactggctgccgcgcagcctgcggcgcgacatgcgccgcatcgagtcggcg
gtgcacgagctcgagcagcgcaacgggcgccagccgagcgaggtggagctcgcggaatta
ctggggatgccgctcgtcgagtaccagcgcatgctgcaggacgcgcgtggctaccagctc
gtgcatttcgaggacttcaccgacggcgagggcgaggactacttcgagcgccacctcggc
gcgcacgagtcgaatccggccgacatcctcgagaaggcggacatgcgtaacgcgctcgtg
cgggcgatcgaagatctgcccgagcgcgagaaactgatgatggcgctgtactacgacgag
gagctcaacctgcgcgagatcggtgaggtgctgggcgtttccgagtcgcgcgtgtgccag
ctccacagccaggctgtggcgcgcctgcgctcgcgcatcctggggaccgcgcggccggcc
ggcgcgacgaccggggcgcgtcgcggacggccgcccaagaatccgccgtccggcgcctga
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