Azoarcus sp. CIB: AzCIB_3658
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Entry
AzCIB_3658 CDS
T04019
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
azi
Azoarcus sp. CIB
Pathway
azi00300
Lysine biosynthesis
azi00470
D-Amino acid metabolism
azi01100
Metabolic pathways
azi01110
Biosynthesis of secondary metabolites
azi01120
Microbial metabolism in diverse environments
azi01230
Biosynthesis of amino acids
Module
azi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AzCIB_3658
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AzCIB_3658
Enzymes [BR:
azi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AzCIB_3658
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
TEX13B-like_middle
Motif
Other DBs
NCBI-ProteinID:
AKU13551
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All DBs
Position
4082192..4083445
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AA seq
417 aa
AA seq
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MNTAAKSASAAPVHAPMSQFPIRNGELIVGGVPLTRLAARVGQTPFYAYDRHLLGARVGE
LRDALPDAIDLHYAVKANPMPALVGFMAELVDGLDVASAGELRVALDAGCPPADISFAGP
GKRDTELEQAVAAGVLLNVESAGELRRLADISARLGWPARVALRVNPDFELKSSGMKMGG
GPKPFGVDAEAAPELLAELGRLGLAFEGFHLFAGSQNLRAEAIVEAQQKSFELALRLADA
APAPVRVLNLGGGFGIPYFPGETRLDLAPIGANLAETAHAAESRMPDATLVIELGRYLVG
EAGVYVSRVVDRKVSRGQVFLVCDGGLHHHLSASGNFGQVIRKNYPTAIGNRADAPASTV
STAVGPLCTPLDLLAERMPLPEAQVGDLVVIFQSGAYGASASPQAFLGHPPVVEVLV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaccgccgccaaatctgcttccgccgcccccgttcacgcaccgatgtcgcagttc
ccgatccgcaacggcgaactgatcgtcggcggcgtgccgctcacgcgcctggcggcgcgc
gtcggacagacaccgttctacgcctacgaccggcacctgctgggcgcacgcgtgggcgaa
ctgcgggacgcgctgcccgatgcgatcgacctccactatgccgtgaaggcaaacccgatg
cccgcgctggtcgggttcatggccgaactcgtcgacggcctcgacgtggcgtccgcaggc
gagttgcgcgtggcgctcgacgccggctgcccgcccgccgacatcagcttcgccggcccc
ggcaagcgcgacaccgagctcgagcaggcggtcgcggccggcgtgctgctgaacgtcgaa
tcggcgggcgagctgcgtcggcttgcggacatctccgcccgcctcggctggccggcgcga
gtcgccctgcgcgtgaatccggacttcgaactcaagagctcgggcatgaagatgggcggt
ggccccaagcccttcggtgtcgatgccgaggcggcgccggagctcctcgccgagctcgga
cggctcgggctcgccttcgagggcttccacctcttcgcgggctcgcagaacctgcgcgcg
gaggcgatcgtcgaagcgcaacagaagagcttcgagctcgcgttgcgcctcgccgacgca
gcgcctgcgccggtgcgcgtgctgaacctcggcggaggcttcggaatcccctactttccc
ggcgaaacgcgcttggatcttgccccgatcggcgcgaatctcgccgaaaccgcgcatgca
gcggaaagccggatgccggacgcgacgctcgtcatcgaactggggcgctatctcgtcggc
gaggcgggcgtctacgtcagccgcgtcgtcgaccgcaaggtgtcacgcgggcaggtcttc
ctcgtgtgcgacggcggcctgcaccaccacctctcggcctcgggcaatttcggccaggtc
atccgcaagaactatccgacggcgatcggcaaccgcgcggacgcgcccgcctccacggtg
tcgacggcggtcggtcccctgtgcaccccgctcgatctcctggcggagcgcatgcctctg
ccggaagcgcaggtcggcgatctcgtcgtgatcttccagtccggcgcctacggcgcgagc
gccagcccgcaggccttcctcgggcatccgccggtggtcgaggtgctggtctag
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