Azoarcus sp. CIB: AzCIB_3724
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Entry
AzCIB_3724 CDS
T04019
Name
(GenBank) ATP-dependent DNA helicase protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
azi
Azoarcus sp. CIB
Pathway
azi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AzCIB_3724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azi03019
]
AzCIB_3724
03400 DNA repair and recombination proteins [BR:
azi03400
]
AzCIB_3724
Enzymes [BR:
azi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AzCIB_3724
Messenger RNA biogenesis [BR:
azi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AzCIB_3724
DNA repair and recombination proteins [BR:
azi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AzCIB_3724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AKU13617
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All DBs
Position
4161460..4163289
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AA seq
609 aa
AA seq
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MPAMTAHATPSPLHVLEHVFGYTAFRGEQQAIVEHVTAGGDALVLMPTGGGKSLCYQVPA
LLRPGTAVVVSPLIALMQDQVSALKEAGVAAAYLNSSQAADESVTVERDLVGGRLDLLYV
APERLLTGRLLATLDRLHEAGRIALFAIDEAHCVSQWGHDFRPEYLQLSVLSERYPGVPR
IALTATADAETREEIAQRLGLATARRFISSFDRPNIRYRMVDKDNPRNQLLAFIRDDHAG
DAGIVYCLSRRKVEETAAWLEEQGIRALAYHAGMPQDVRAANQSRFLREDGLVMCATIAF
GMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLASQAWMAWGAQDIVQQRRMIDESE
GNEDFKRRGRARLDALVGLVETTACRRQHLLAHFGETGQPCGNCDNCLEPPSTWDATDAA
RKALSGVFRTGQRFGAGHVIDVLRGELTDKVRDWEHDKVSTFGIGADVDEKTWRTLFRQL
VARGLLAVDHDRHNALTLTDLARPLLRGESGFALRLAPEKRRTKRTRSNRMEILDGVPLT
LFDRLRAWRAATARERNVPAYVIFHDATLREIALARPASIEELAHISGIGDRKLEAYGAS
IIAEIARDV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgatgaccgcacacgccacgccctccccgctccacgtcctcgagcacgtcttc
ggctacaccgccttccgcggcgaacaacaggccatcgtcgaacacgtgacggcaggcggc
gacgcgctggtattgatgcccaccgggggcggcaagtcgctgtgctaccaggttccggcc
ctgctgcgccccggcactgccgtggtcgtgtcgccgctgatcgccctgatgcaggaccaa
gtcagcgccctgaaggaggctggcgtggcggcagcctacctgaactcgagccaggcggcc
gacgaatccgtcacggtggaacgcgacctcgtcggcggtcggctcgacctgctgtacgtg
gcgccagaacgcctgctcaccggccggctgctggcgacgctcgaccgcctgcacgaggcc
ggccgcattgcgctgttcgcgatcgacgaggcgcactgcgtgtcgcagtggggccacgac
ttccgcccggagtacctgcagctctcggtgctgtcggagcgctacccgggcgtgccgcgc
atcgcgctgaccgcgacggcggacgccgagacgcgcgaggagatcgcgcagcgcctggga
ctcgccaccgcacgccgcttcatctccagcttcgaccggccgaacatccgctatcgcatg
gtcgacaaggacaacccgcgcaaccagctgctcgccttcatccgcgacgaccacgcgggc
gacgccggcatcgtctattgcctgtcgcggcgcaaggtcgaggagaccgccgcgtggctg
gaggaacaggggatccgcgcgttggcctatcacgccgggatgccgcaggacgtgcgcgcg
gcaaaccagagccgcttcctgcgcgaggacgggctggtgatgtgcgcgacgatcgccttc
ggcatgggcatcgacaagcccgacgtgcgcttcgtcgcccacctcgacctgccgcgatcg
atcgagggctactaccaggaaaccggccgcgcgggccgcgacggcctcgcttcgcaggcg
tggatggcctggggcgcgcaggacatcgtgcagcagcggcgcatgatcgacgaatccgag
ggcaacgaggacttcaagcgccgcggccgtgcccgcctcgacgcgctcgtcggcctggtc
gagacgaccgcctgccgccgccagcatctgctcgcgcatttcggcgagacaggccagccc
tgcgggaactgcgacaactgcctggaaccgccgagcacctgggacgccacggatgccgcg
cgcaaggcgctgtcgggcgtgttccgcaccggccagcgtttcggtgctggccacgtgatc
gatgtgctgcgcggcgagctcaccgacaaggtgcgcgactgggaacatgacaaagtgagc
accttcggcatcggcgccgacgtcgacgagaagacctggcgcacgctgttccgccagctc
gtcgcccgcggcctgctggccgtcgaccacgaccgccacaacgcgctgacgttgaccgat
ctggcgcgaccgctactgcgcggggagtcggggtttgcgctgcggcttgcgcccgagaag
cggcgcacgaagcgcacgcgcagcaaccgcatggagatcctcgacggcgtgccgctgacg
ctgttcgatcgcctgcgcgcctggcgcgcggcgaccgcccgcgagcgcaatgtgccggcg
tatgtaatctttcacgacgccacgctgcgcgaaatcgcgctcgcgcggcccgcatcgatc
gaggaactcgcacatatctcgggtatcggcgatcgcaagctcgaagcctacggggcgtcg
atcatcgccgagatcgcgcgcgacgtctga
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