Azoarcus sp. CIB: AzCIB_3875
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Entry
AzCIB_3875 CDS
T04019
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
azi
Azoarcus sp. CIB
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azi03016
]
AzCIB_3875
Enzymes [BR:
azi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AzCIB_3875
Transfer RNA biogenesis [BR:
azi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AzCIB_3875
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GFIT
Motif
Pfam:
RNB
Rbx_binding
Motif
Other DBs
NCBI-ProteinID:
AKU13768
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Position
4325244..4327157
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AA seq
637 aa
AA seq
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MFVLFEEDGAFKAGTILADNDSSLQVETSHGKRVKLKSNHVLMRFREPSPGDLLNRAEAG
AEELDTAFLWEVCGDDEFAFDAFAAEYHGHAPNAVESASILLRLHSAPMYFHRKGRGRFR
KAPTDILQAALAGQEKKRQQAEAIERMRAELVAGRMPAEIAGMLPQLLYRPDRNRVETKA
FEAACVDAGLSAPRLLLQCGALESSYDFHYNRFLFEYFEEGTAFPRFEAPTDPADLPLAQ
VAAFSIDDATTTEIDDAFSVTPREGGGWRIGIHIAAPALGFARGSSLDAIARRRLSTVYM
PGNKITMLPDAIVETFTLAAGRECPAVSLYLDVTAALAVQRHETVVERVPIVANLRHHDI
EPLFNEQVLHDHSGGPDFKWKRELTLLWDLANVLEAGRGKAEDNRNQVDFNFYVDWQTHT
ADGPGYVTITQRKRGSPLDKLVAEMMILANSTWGKLLDEAGIPGLYRVQSGGKVRMSTAA
GPHDGLGVDCYAWSSSPLRRYVDMVNQWQIVSVLRDEAPAFAPKSADLMAAMRDFDVTYA
AYADFQRQMERYWCLRWLRQQPGITVDGKVLRDNLVRLDAIPLMVKVPSLPVMLPGTRVR
LTVEHSDLLDVDISARFVEMLAEPDPAEAADAALEGN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgctgttcgaagaggatggggccttcaaggccgggaccatcctcgctgataac
gattcctcgctgcaggtcgagacgtcccacggcaagcgcgtgaagctgaaaagcaaccac
gtgctgatgcgcttccgcgagccgtcgccgggcgacctgctcaaccgcgccgaagccggc
gccgaggaactggacaccgccttcctgtgggaagtgtgcggcgacgacgagttcgccttc
gacgcgtttgccgccgaataccacggccacgcaccgaatgccgtcgaatccgcgagcatc
ctgctgcgcctgcactcggcgccgatgtacttccatcgcaagggccgcggccgcttccgc
aaggcgcccaccgacatcctgcaggccgcgctcgccggccaggagaagaagcgccagcag
gccgaagcgatcgagcgcatgcgcgccgagctggtcgcgggccggatgccggccgagatc
gccggcatgctgccgcaactcctctaccgccccgaccgcaaccgcgtcgagaccaaggcc
ttcgaggccgcctgcgtagacgccgggctatcggccccgcgcctgctgctgcaatgcggc
gcgctggagtcgagctacgacttccactacaaccgctttctgttcgaatacttcgaggaa
ggcaccgccttcccgaggttcgaagccccgaccgatccggcggatctgccgctcgcgcag
gtcgccgcgttctcgatcgacgacgccaccaccaccgaaatcgacgacgccttctcggtg
acgccgcgcgaaggcggcggctggcgcatcggcatccacatcgccgcacccgcgctcggc
ttcgcacgcggctcctcgctcgacgcgatcgcgcgccgacgcctgtccaccgtgtatatg
ccgggcaacaagatcacgatgctgcccgatgcgatcgtcgagaccttcacgctcgccgcc
ggccgcgaatgccccgccgtatcgctgtatctcgacgtcaccgcggcactcgccgtccag
cgccacgagaccgtcgtcgagcgcgtgcccatcgtcgcgaacctgcgccaccacgatatc
gagccgctcttcaacgagcaggtgctgcacgaccactccggtggccccgacttcaagtgg
aagcgcgaactcacgctgctgtgggatctcgccaacgtgctcgaggccggccgcggcaag
gccgaggacaaccgcaaccaggtcgacttcaacttctatgtcgactggcagacgcacacc
gcggacggccctggctacgtcacgatcacccagcgcaagcgcgggtcgccactcgacaag
ctggtcgccgagatgatgattctcgccaactccacctggggcaagctcctcgacgaagcc
ggcattcccggcctgtaccgcgtgcagagcggcggcaaggtgcgcatgtccaccgccgcc
ggcccgcacgacggcctcggcgtggactgttacgcatggtcgagctcgccgctgcgccgc
tatgtcgacatggtcaaccagtggcagatcgtctcggtactgcgcgacgaagcgcccgcg
ttcgcaccgaagtccgccgacctgatggccgcgatgcgcgacttcgacgtcacctacgcc
gcctacgccgacttccagcgccagatggaacgctactggtgcctgcgctggctacgccag
cagccgggcatcaccgtcgatggcaaggtgctgcgcgacaacctcgtgcgcctcgacgcg
atcccgctgatggtcaaggtgccctcgctgccggtgatgctgccgggcacgcgcgtgcgc
ctgacggtcgaacacagcgacctgctcgacgtcgacatcagcgcacgcttcgtcgagatg
ctcgccgagcccgatcccgcggaagcggccgacgcagcactcgaaggcaactga
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