KEGG   Azoarcus sp. CIB: AzCIB_3875
Entry
AzCIB_3875        CDS       T04019                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
azi  Azoarcus sp. CIB
Brite
KEGG Orthology (KO) [BR:azi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:azi03016]
    AzCIB_3875
Enzymes [BR:azi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     AzCIB_3875
Transfer RNA biogenesis [BR:azi03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AzCIB_3875
SSDB
Motif
Pfam: RNB Rbx_binding
Other DBs
NCBI-ProteinID: AKU13768
LinkDB
Position
4325244..4327157
AA seq 637 aa
MFVLFEEDGAFKAGTILADNDSSLQVETSHGKRVKLKSNHVLMRFREPSPGDLLNRAEAG
AEELDTAFLWEVCGDDEFAFDAFAAEYHGHAPNAVESASILLRLHSAPMYFHRKGRGRFR
KAPTDILQAALAGQEKKRQQAEAIERMRAELVAGRMPAEIAGMLPQLLYRPDRNRVETKA
FEAACVDAGLSAPRLLLQCGALESSYDFHYNRFLFEYFEEGTAFPRFEAPTDPADLPLAQ
VAAFSIDDATTTEIDDAFSVTPREGGGWRIGIHIAAPALGFARGSSLDAIARRRLSTVYM
PGNKITMLPDAIVETFTLAAGRECPAVSLYLDVTAALAVQRHETVVERVPIVANLRHHDI
EPLFNEQVLHDHSGGPDFKWKRELTLLWDLANVLEAGRGKAEDNRNQVDFNFYVDWQTHT
ADGPGYVTITQRKRGSPLDKLVAEMMILANSTWGKLLDEAGIPGLYRVQSGGKVRMSTAA
GPHDGLGVDCYAWSSSPLRRYVDMVNQWQIVSVLRDEAPAFAPKSADLMAAMRDFDVTYA
AYADFQRQMERYWCLRWLRQQPGITVDGKVLRDNLVRLDAIPLMVKVPSLPVMLPGTRVR
LTVEHSDLLDVDISARFVEMLAEPDPAEAADAALEGN
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgttcgtgctgttcgaagaggatggggccttcaaggccgggaccatcctcgctgataac
gattcctcgctgcaggtcgagacgtcccacggcaagcgcgtgaagctgaaaagcaaccac
gtgctgatgcgcttccgcgagccgtcgccgggcgacctgctcaaccgcgccgaagccggc
gccgaggaactggacaccgccttcctgtgggaagtgtgcggcgacgacgagttcgccttc
gacgcgtttgccgccgaataccacggccacgcaccgaatgccgtcgaatccgcgagcatc
ctgctgcgcctgcactcggcgccgatgtacttccatcgcaagggccgcggccgcttccgc
aaggcgcccaccgacatcctgcaggccgcgctcgccggccaggagaagaagcgccagcag
gccgaagcgatcgagcgcatgcgcgccgagctggtcgcgggccggatgccggccgagatc
gccggcatgctgccgcaactcctctaccgccccgaccgcaaccgcgtcgagaccaaggcc
ttcgaggccgcctgcgtagacgccgggctatcggccccgcgcctgctgctgcaatgcggc
gcgctggagtcgagctacgacttccactacaaccgctttctgttcgaatacttcgaggaa
ggcaccgccttcccgaggttcgaagccccgaccgatccggcggatctgccgctcgcgcag
gtcgccgcgttctcgatcgacgacgccaccaccaccgaaatcgacgacgccttctcggtg
acgccgcgcgaaggcggcggctggcgcatcggcatccacatcgccgcacccgcgctcggc
ttcgcacgcggctcctcgctcgacgcgatcgcgcgccgacgcctgtccaccgtgtatatg
ccgggcaacaagatcacgatgctgcccgatgcgatcgtcgagaccttcacgctcgccgcc
ggccgcgaatgccccgccgtatcgctgtatctcgacgtcaccgcggcactcgccgtccag
cgccacgagaccgtcgtcgagcgcgtgcccatcgtcgcgaacctgcgccaccacgatatc
gagccgctcttcaacgagcaggtgctgcacgaccactccggtggccccgacttcaagtgg
aagcgcgaactcacgctgctgtgggatctcgccaacgtgctcgaggccggccgcggcaag
gccgaggacaaccgcaaccaggtcgacttcaacttctatgtcgactggcagacgcacacc
gcggacggccctggctacgtcacgatcacccagcgcaagcgcgggtcgccactcgacaag
ctggtcgccgagatgatgattctcgccaactccacctggggcaagctcctcgacgaagcc
ggcattcccggcctgtaccgcgtgcagagcggcggcaaggtgcgcatgtccaccgccgcc
ggcccgcacgacggcctcggcgtggactgttacgcatggtcgagctcgccgctgcgccgc
tatgtcgacatggtcaaccagtggcagatcgtctcggtactgcgcgacgaagcgcccgcg
ttcgcaccgaagtccgccgacctgatggccgcgatgcgcgacttcgacgtcacctacgcc
gcctacgccgacttccagcgccagatggaacgctactggtgcctgcgctggctacgccag
cagccgggcatcaccgtcgatggcaaggtgctgcgcgacaacctcgtgcgcctcgacgcg
atcccgctgatggtcaaggtgccctcgctgccggtgatgctgccgggcacgcgcgtgcgc
ctgacggtcgaacacagcgacctgctcgacgtcgacatcagcgcacgcttcgtcgagatg
ctcgccgagcccgatcccgcggaagcggccgacgcagcactcgaaggcaactga

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