Azoarcus sp. CIB: AzCIB_3888
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Entry
AzCIB_3888 CDS
T04019
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
azi
Azoarcus sp. CIB
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azi03400
]
AzCIB_3888
Enzymes [BR:
azi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AzCIB_3888
DNA repair and recombination proteins [BR:
azi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AzCIB_3888
Prokaryotic type
AzCIB_3888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKU13781
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Position
complement(4344219..4345658)
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AA seq
479 aa
AA seq
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MRSALVWFRRDLRSHDHAALYHALSRFDQGHCAFVFDTEILDALPGRSDRRVEFIWRSLQ
ELDIELDALSRRAGGGGAGIVVRHGRSDELIPALAAQLGVTAVLTNRDYEPAAIARDRRV
AEGLAAEGIGFEDFKDQVIFERDEILTQGGQPYSVFTPYRNAWLKKLDGFYVQAYPVERY
AAQLAPKADGERVPGLDELGFVATNLAELRLPTGMSGGRALFGDFAGRIGRYREARDYPA
VKGVSYLSAHLRFGTVSIRELAAFAWADGGAGAESWLGELVWRDFYHMILWHHPRVVTGC
FRPEYDRIAWDAAPDLFAAWCEGRTGYPLVDAAMRQLDTTGYMHNRLRMIVASFLTKDLG
IDWRRGERHFADQLIDYDLAANNGGWQWAASTGCDAQPYFRIFNPVTQSARFDPEGRFIR
RYVPELARVPDKYIHAPWKMGAADQVAAGVRLGRDYPAPVVDHGLARERTLARFAVVRS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccgccctcgtctggttccgccgcgacctgcgcagtcacgatcacgccgcgctg
tatcacgcgctgagccgcttcgaccaagggcattgcgcgttcgtcttcgacacggagatc
ctcgacgccttgccgggccgcagcgaccggcgcgtcgagttcatctggcgcagcctgcag
gagctggatatcgagctcgacgcgctgtcgcgccgggcgggcggcggcggggcgggcatc
gtcgtgcggcacgggcgctccgacgaattgatcccggccctggcggcgcagctgggcgtg
acggcggtgctgaccaatcgcgactacgagcctgccgcgatcgcacgcgaccggcgggtg
gcggagggcctcgccgcggaagggatcggtttcgaggatttcaaggaccaggtgatcttc
gagcgcgacgagattctcacgcagggcgggcaaccgtacagcgtgttcacgccctaccgg
aacgcgtggctgaagaagctcgatggcttctacgtgcaggcgtatccggtcgaacgctac
gccgcgcagctggcgcccaaggcggacggggagcgcgtgccgggcctcgatgagcttggc
ttcgtggcgacgaacctcgccgaactgcgcctgccgaccggcatgtccggcggccgcgcc
ctgttcggggacttcgccgggcgtatcgggcgctaccgcgaggcgcgcgattatccggcc
gtgaagggcgtgtcctatctttccgcgcatctgcgtttcggcaccgtgtcgatccgcgaa
ctggcggcgttcgcgtgggccgacggtggggccggggcggagagttggctcggcgagctg
gtgtggcgcgacttctaccacatgatcctgtggcaccacccgcgcgtcgtgacggggtgc
tttcggcccgagtacgatcgtatcgcgtgggacgctgcgcccgacctgttcgcggcgtgg
tgcgaggggcgcacgggttatccgctcgtcgacgcggcgatgcgccagctcgacacgacg
ggctacatgcacaaccgcctgcgcatgatcgtcgcgtccttcctgaccaaggacttgggc
atcgactggcgccgcggcgagcggcatttcgccgaccaactgatcgattacgatctggcg
gcaaacaacggcggatggcagtgggcggcgtcgacgggctgcgatgcgcagccgtatttc
cgcatcttcaatccggtgacgcagtcggcgcgcttcgatccggaggggcgcttcatccgc
cgctacgtgccggaactcgcacgcgtcccggacaagtacatccatgcgccgtggaagatg
ggcgcggcagaccaagtggctgcgggcgtgcgcctcggccgggattatccggcgccggtc
gtcgatcacgggttggcgcgcgagcgcacgctcgcgcgcttcgccgtcgtgcggagctga
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