Azoarcus sp. CIB: AzCIB_4046
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Entry
AzCIB_4046 CDS
T04019
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
azi
Azoarcus sp. CIB
Pathway
azi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
azi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AzCIB_4046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azi03021
]
AzCIB_4046
03400 DNA repair and recombination proteins [BR:
azi03400
]
AzCIB_4046
Enzymes [BR:
azi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AzCIB_4046
Transcription machinery [BR:
azi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AzCIB_4046
DNA repair and recombination proteins [BR:
azi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AzCIB_4046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AKU13939
LinkDB
All DBs
Position
complement(4499379..4503512)
Genome browser
AA seq
1377 aa
AA seq
DB search
MAYSYTEKKRIRKSFAKRAAVLDVPFLLATQIESFASFLQAETPPLTRLNQGLQAAFTSI
FPIASHSGNARLEFVQYMLGEPAFDVKECQQRGLTFASPLRARVRLVILDRDAPKETVKE
VKEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDCLFFRVDRRRKMPATILLRAIGMTPEQILETFHDFDTFQLRGEE
VAFELVPDRLRGDVAKFDITDGDGKVIVARDKRITAKHIRELEQAGIKTMVVPDDFVLGR
IVARNVVDPETGELIARANDEITEDLLGKLRDAGVKDLQTLYVNDLDRGPYISQTLRIDE
TADQWAARVAIYRMMRPGEPPTEDAVEALFQGLFYSEERYDLSSVGRMKFNRRAYPEKIE
DKAPGWLKRFYEIVGARGEEGTATLSNEDILAVMSVLVELRNGRGEIDDIDHLGNRRVRS
VGELAENQFRAGLVRVERAVKERLSQAESDNLMPHDLINAKPISAAIKEFFGSSQLSQFM
DQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSL
AVYAQTNRHGFLETPYRKVADGKVTDQIDFLSAIEEGQYVIAQANADIGEDGTLQGDLVS
CRHKGEFTLAMADQVQYMDVAPGQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRP
EKPLVGTGIERTVAVDSGTAVQAMRGGMVDYVDANRIVVRVNDDETLAGEVGVDIYNMIK
YTRSNQNTNINQRPIVKVGDLIGKGDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDS
ILISERVVAEDRFTSIHIEELTVVARDTKLGPEEITRDIASLGEAQLSRLDESGIVYIGA
EVDAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMNGTVIDVQVFT
REGIERDKRAQSIIDDMLRSFKTDLADQMRIVERDAFARIRRLITGHKANGGPKKLAKGA
EITADYLDSLEFYHWFDIRMADEELATQLEAVREGLEKTRKDFEQAFEIKKKKLTQGDEL
PPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSRIVPVEDMPHMADGTPVDIVLNPLG
VPSRMNIGQILETHLGWAAKALGNRIGQMVRSNTAAAEIRDLLEQIYNTKGHPEDLASLN
DKEVVELASNLSKGVPFATPVFDGAKEEEIEAMFALAGIESGGQVALYDGRTGEAFDRKV
TVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVTGRTKVYESIVKGEHKIDAGMPESFNVLVKEIRSLAIDIDLDTY
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcctacaccgaaaagaaacgtatccgcaagagcttcgccaagcgcgcggca
gtgctggacgtacctttcctcctcgccacccagatcgagtcgttcgcctcgttcctgcag
gccgaaacgccgccgctgacacgcctgaatcagggcttgcaggccgctttcacctcgatc
ttcccgatcgcaagccacagtggcaatgcgcggctcgaattcgtgcaatacatgctcggc
gagccggcgttcgacgtgaaggaatgccagcagcgcggtctgaccttcgcgtcgccgctg
cgcgcgcgggtgcgcctggtgatcctcgaccgcgacgcgccgaaggagacggtgaaggaa
gtcaaggagcaggaagtgtacatgggcgagattccgctcatgacctctaccggttcgttt
gtaatcaacggcaccgagcgcgtgatcgtgtcgcagctccaccgctcgcctggcgtgttt
ttcgagcacgaccgcggcaagactcactcgtcgggcaaactgctgttctcggcacgtatc
attccctaccgcggttcctggctcgacttcgaattcgatccgaaggactgcctgttcttc
cgcgtggaccgtcgccgcaagatgcccgcgacgatcctgctgcgtgccatcggcatgacg
ccggagcagatcctcgagactttccacgacttcgatacgttccagctcaggggtgaagag
gtcgccttcgagctggtaccggatcgcctgcgcggcgacgtggccaagttcgacatcacc
gacggtgacggcaaggtcatcgtcgcgcgcgacaagcgcatcacggcaaagcacatccgc
gagctcgagcaggccggcatcaagaccatggtcgtgcccgacgatttcgtgctggggcgc
atcgttgcccgcaacgtcgtcgaccccgagaccggtgaactgatcgcgcgcgccaatgac
gagatcacggaagacctgcttggcaagctgcgcgacgcgggcgtgaaggatctgcagact
ctgtacgtcaacgacctcgatcgcggcccctacatctcgcagacgctgcgtatcgatgag
acggccgaccagtgggccgcgcgcgtcgccatctaccgcatgatgcgcccgggcgagccg
cccaccgaggacgccgtcgaggcgctgttccagggtctcttctactcggaagagcgctac
gacctgtcgtcggttggccgcatgaagttcaaccgccgcgcctatcccgagaaaatcgag
gacaaggcgcctggttggctcaagcgcttctacgagatcgtcggtgctcgcggtgaagag
ggtaccgcgaccctttcgaacgaggacatcctcgctgtgatgagcgttctggtcgaactg
cgcaacggccgcggcgagatcgacgacatcgaccacctcggtaaccgccgcgtgcgttcg
gttggcgagctcgccgagaaccagttccgtgccgggctggtgcgcgtcgagcgcgccgtc
aaggaacgcctgtcgcaggcggaatccgacaacctgatgccgcacgacctgatcaatgcg
aagccgatttcggccgcgatcaaggagttcttcggctccagccagttgtcgcagttcatg
gaccagaccaacccgttgtccgagatcacgcacaagcgtcgggtctcggccctcggcccg
ggcggtctgacgcgcgagcgtgccggcttcgaggtgcgcgacgtgcatccgacgcactac
ggccgcgtgtgcccgatcgagacgccggaaggtccgaacattggcctgatcaactcgctg
gccgtgtatgcgcagaccaatcgccacggcttcctcgaaacgccgtaccgcaaggtcgcc
gacggcaaggtcaccgaccagatcgattttctgtcggcgatcgaggaaggtcagtacgtt
atcgctcaagcgaacgccgacatcggcgaagacggcaccctgcagggcgaccttgtgtcg
tgccgtcataagggcgaattcacgctggcgatggccgaccaagtccagtacatggacgtc
gcgcccggccagatcgtatcggttgcagcttccctgatcccgttcctcgagcacgacgac
gcgaaccgcgcgcttatgggcgcgaacatgcagcgtcaggcggttccctgcctgcgtccc
gaaaagccgctggtcggtaccggcatcgagcgcacggtcgcggtggactcgggcacggcc
gtgcaggcgatgcgcggcggcatggtcgactatgtcgacgcgaaccggatcgtggtgcgt
gtcaatgacgacgaaaccctcgcgggcgaagtcggcgtcgacatctacaacatgatcaag
tacacgcgctcgaaccaaaacaccaacatcaaccagcgcccgatcgtgaaggtcggcgac
ctcatcggcaagggcgacgtgatcgccgacggtgcctcgaccgacctcggcgagctcgcc
ctcggccagaacatgctggtcgcattcatgccgtggaacggctacaacttcgaggactcg
attctcatctccgagcgcgtcgtcgccgaggaccgcttcacctcgatccacatcgaggag
ctgacggtcgttgcgcgtgacaccaagctcgggcccgaggaaatcacgcgcgacatcgct
tctctgggcgaggcgcagctgtcgcgactcgacgagtcgggcatcgtgtacatcggtgcg
gaagtggatgctggcgacgtgctcgtcggcaaggtcacgccgaagggcgagacccaactc
actcccgaagagaagttgctgcgcgcgattttcggcgaaaaggcgtccgacgttaaggac
acctcgctgcgcgtgccctccggcatgaacggcaccgtcatcgacgtgcaggtgttcacc
cgcgaaggtatcgagcgcgacaagcgtgcccagtcgatcatcgacgacatgctgcgcagc
ttcaagaccgacctcgccgaccagatgcgtatcgtcgagcgcgacgccttcgcgcgtatc
cgtcgcctgatcaccggccacaaggccaacggcgggccgaagaagctggcgaagggtgcc
gagatcaccgccgactacctcgactcgctcgagttctatcactggttcgacatccgcatg
gcggacgaagaactggcgactcaactcgaggcggtccgcgaaggtctggaaaagacccgc
aaggacttcgagcaggccttcgagatcaagaagaaaaagctcacccagggcgacgaactg
cccccgggcgtgcagaagatggtcaaggtctacctcgccgtgaagcgtcgcctgcagccc
ggcgacaagatggccggtcgtcacggtaacaagggtgtggtctcgcgcatcgttccggtc
gaggacatgccgcacatggccgacggtacgccggtggacatcgtgctgaacccgctgggt
gtgccgtcgcgtatgaacatcggccagatcctcgagactcatctcggctgggcagcgaag
gcgctcggcaaccggatcggtcagatggtccgctcgaacaccgcagcggctgaaatccgc
gacctgctcgagcagatttacaacacgaagggtcatcccgaggatctcgcgagcctcaac
gacaaggaagtcgtggagctcgcttcgaacctgagcaagggcgtgccgtttgcgacgccg
gtgttcgacggcgcgaaggaagaggagatcgaggccatgttcgcgctggcgggcatcgag
tccggcgggcaggtcgcgctgtatgacggccgtaccggcgaggccttcgaccgcaaggtc
acggtcggctacaagcacgtgctgaagctgcaccacctggtcgatgacaagatgcacgcc
cgttcgaccggcccatactccctcgttacccagcagccgctgggcggcaaggcgcagttc
ggtggccagcgcttcggtgaaatggaagtgtgggcgctcgaggcctacggcgcggcctat
acgctgcaggaaatgctcaccgtgaagtccgacgacgtgaccggccgtaccaaggtgtac
gaaagcatcgtcaagggcgagcacaagatcgatgcgggcatgcccgagtccttcaatgtg
ctggtgaaggaaatccgctcgctcgcgatcgacatcgatctggacacgtactga
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integrated database retrieval system
