Azospirillum sp. B510: AZL_001040
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Entry
AZL_001040 CDS
T01169
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
azl
Azospirillum sp. B510
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azl03016
]
AZL_001040 (rnd)
Enzymes [BR:
azl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AZL_001040 (rnd)
Transfer RNA biogenesis [BR:
azl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AZL_001040 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAI70742
UniProt:
D3NQR3
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All DBs
Position
115504..116130
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AA seq
208 aa
AA seq
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MPIDLHDGDLPDGLDLAAGARDNCVAIDTETMGLNPHRDRLCLVQLSAGDGAVHLVQFRP
GRYEAPNLKRLLTDPGVTKLFHFARFDVAVMKAYLGVDCRPVYCTKVASKLVRTFTDRHG
LKDLCKDLLGVEISKQQQSSDWGAPELTTDQMKYAASDVLHLHDLKAKLDVMLAREGRTH
LAQACFDFLPARGELDLGGWETPDILAH
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgaccttcatgacggcgacctccccgacggcctcgacctcgccgccggcgcc
cgcgacaactgtgtcgccatcgacaccgagaccatggggctgaacccccatcgcgaccgt
ctctgcctggtgcagctgtcggccggcgacggtgccgtccatctggtgcagttccgtccc
ggccggtatgaggcgccgaacctgaagcgtctgctgaccgatcccggcgtgaccaagctg
ttccacttcgcccgtttcgacgtggcggtgatgaaggcctatctcggcgtcgactgccgg
ccggtctattgcaccaaggtcgcctccaagctggtccgcaccttcaccgaccgccacggc
ctgaaggatctgtgcaaggatctgctgggcgtggaaatctccaagcagcagcagtcctcc
gactggggcgcgcccgaactgaccaccgaccagatgaagtacgcggcatccgacgtgctg
cacctgcatgacctgaaggcgaagctggacgtcatgctggcgcgcgaggggcggacccat
ctggcgcaggcctgcttcgacttcctgcccgcccgcggcgagctggatctcggcggctgg
gaaaccccggacattttggcgcactga
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