Azospirillum sp. B510: AZL_003330
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Entry
AZL_003330 CDS
T01169
Symbol
ygcA
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
azl
Azospirillum sp. B510
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
azl03009
]
AZL_003330 (ygcA)
Enzymes [BR:
azl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AZL_003330 (ygcA)
Ribosome biogenesis [BR:
azl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AZL_003330 (ygcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Met_10
MTS
Cons_hypoth95
TRAM
Methyltransf_25
TRAPP
Motif
Other DBs
NCBI-ProteinID:
BAI70971
RhizoBase:
AZL003330
UniProt:
D3NRE2
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All DBs
Position
382348..383679
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AA seq
443 aa
AA seq
DB search
MTRPAKRPFAKGRPAARKTAQPPRDLREIEVTITDVGARGDGLALAEGVRLFVPHTVAGD
RVRVRAGDGDGKGEGVRAELLEVLEPGPGRRSPPCRHFGRCGGCTLQQMEDDTYAAWTVG
VVRGALERVGLGDTALEPLARTPAAARRRARFAALKRGGRVWFGFNERQSHRLVDLEECP
VLAPRLFALVEPLRVLLAGLLPEGGDADVMLTDLEGGADLLLIGPRGLDRAAREALVGFE
PERVARIAWQPADRAAVEPVANRRPAFIRFASVPIQPPPGAFLQASAEGEAALLAAVRAG
VGQAARIADLFAGVGTFSIPLAQQASVHAVEGDEAAVTALGRSVQGLRLTAERRDLFENP
LGVKELNRYDAVVFDPPRAGAAAQAAALAGARVPRVVGVSCNPASFARDARVLVDGGYRL
VKVWPVDQFLWSAHMELVGLFER
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacacgccccgccaagcgtcccttcgccaagggacgcccagccgcccgcaagaccgcc
cagccgccccgcgacctgcgggagatcgaggtgaccatcaccgatgtcggggcgcgcggc
gacgggctggcgctggccgagggcgtacgcctgttcgtgccgcacacggtggccggcgac
cgcgtacgggtcagagccggcgatggcgatgggaagggggagggcgtacgcgccgagctg
ctggaggtgctggagcccggtccaggccgccggtccccgccctgccgccatttcggccgc
tgcggcggctgtacgctccagcagatggaggacgatacctatgccgcctggacggttggc
gtggtgcgcggcgcgctggagcgggtcgggctgggcgatacggcgctggagccgttggcg
cgtacacccgccgccgcccgccgccgcgcccggttcgcggcgctgaagcgcggcgggcgc
gtctggttcggcttcaacgagcggcagagccatcggctggtcgatctggaggagtgtccg
gtgctggcgccccgcctgttcgccctggtggagccgctgcgggtgctgctggccgggctg
ctgccggagggcggtgacgccgacgtgatgctgaccgacctggagggcggggccgacctg
ctgctgatcgggccgcgcggcctcgaccgtgccgcccgcgaggcgctggtcggtttcgag
ccggagcgcgtcgcccgcatcgcctggcagcccgccgaccgcgcggcggtggagccggtg
gcgaaccgccgtccggccttcatccgtttcgcaagcgttccgatccagccgccgccgggt
gccttcctccaggccagcgccgagggggaggccgccctgctggcggcggtgcgcgcgggg
gtggggcaggcggcccggatcgccgacctgttcgccggcgtcggcaccttttccattccg
cttgcgcaacaagcgtcggttcatgcggtggagggggatgaagccgcggtgacggcgctc
ggccgctcggtgcaggggctgcggctgacggcggagcggcgcgacctgttcgaaaacccg
ctgggggtgaaggaactgaaccgctatgacgcggtggtgttcgacccgccgcgcgccggt
gcggcggcccaggcggcggcgctggccggagccagggtgccgcgggtggtgggggtgtcc
tgcaatccggccagcttcgcccgcgatgcgcgggttctggtcgatggcggctatcgtctg
gtcaaggtctggccggtcgaccagttcctgtggtcggcccatatggaactggtcggcctg
ttcgagagatga
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