Azospirillum sp. B510: AZL_010580
Help
Entry
AZL_010580 CDS
T01169
Symbol
rpoD
Name
(GenBank) RNA polymerase primary sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
azl
Azospirillum sp. B510
Pathway
azl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AZL_010580 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azl03021
]
AZL_010580 (rpoD)
Transcription machinery [BR:
azl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AZL_010580 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF4763
DUF3829_2nd
DUF2935
WH_Rok
Motif
Other DBs
NCBI-ProteinID:
BAI71696
LinkDB
All DBs
Position
1194367..1196379
Genome browser
AA seq
670 aa
AA seq
DB search
MATKAANSVEVSETREESADGPLMDGMGLAVKKMIARGKERGYVTYDELNAALPQDSSSS
EQIEDTMAMLSEMGINIVESEEQDSENSGEGASDGEGRSSGNLDDDDIGRTDDPVRMYLR
EMGSVELLSREGEIAIAKRIEAGREMMIGAICESPLTIRAILEWHDSLMEGKMLLRDIID
LDATYGGGPDGEEMPEGLAEVVEAAGAAGPAGAAPAADAPADEEGDEPRPPRAEGEGEEG
EEGEEGENALSLSAMEAALKPQVIETFENIKATYDKLHKLHESRMAAMQRGEDLGKQTDR
KYDKLKTEMVELMNTVRLNNQRIEQLVEQLYGLNRKLTGFEGRLLRMATECRVKREDFLN
QYFGHELDPNWLERIRGLNPKTWGKFAEKYDGDIRKTREAISNVAEEARLPINEFRRIVS
TVQKGEKEASRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRR
GYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPTPEEL
AERLMMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAVLPLDAAIQANLRET
TTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSR
SRKLRSFLDT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaaagctgcgaacagcgtggaagtttccgaaacgcgggaggaatccgcagac
ggtcctctgatggacggcatgggtttggccgtcaagaagatgatcgcccgcggcaaggag
cgcgggtatgtcacctacgacgagctgaacgcagcgctgccgcaggattcgtcctcgtcc
gagcagatcgaagacacgatggcgatgctgtccgagatgggcatcaacatcgtcgagtcg
gaagagcaggattcggagaacagcggcgagggggccagcgacggcgaaggccggtcgtcg
ggcaatctcgacgacgacgacatcggccgtaccgacgaccccgtgcgcatgtatctgcgc
gagatggggtcggtggagctgctgtcgcgcgaaggcgaaatcgccatcgccaagcggatc
gaagccggccgcgagatgatgatcggcgcgatctgcgaatcgcccctgaccatccgcgcc
atcctggagtggcatgattccctgatggaagggaagatgctgctgcgcgacatcatcgac
ctggacgccacctatggcggtggtccggacggcgaggagatgccggaggggttggccgag
gtggtcgaggccgccggggccgccggccccgccggggcggcccccgccgccgacgcgccg
gccgacgaggagggcgacgaaccgcgcccgccgcgcgccgaaggcgaaggcgaagagggc
gaggaaggcgaggagggcgagaacgccctgtcgctgtccgccatggaagccgcgctgaag
ccgcaggtcatcgagaccttcgagaacatcaaggcgacctacgacaagctgcacaagctg
catgagtcccgcatggcggcgatgcagcgcggcgaggatctcggcaagcagacggacagg
aagtacgacaagctaaagaccgagatggtcgagctgatgaacaccgtccgcctgaacaac
cagcgcatcgaacagctggtcgagcagctctatggcctgaaccgcaagctgaccggcttc
gaaggccgtctgctgcgcatggccaccgagtgccgggtgaagcgcgaggacttcctgaac
cagtatttcggccatgagctggacccgaactggctggagcgcatccgtggcctgaacccc
aagacctggggcaagttcgcggagaagtatgacggcgacatccgcaagactcgcgaggcg
atctccaacgtcgccgaggaagcgcgcctgccgatcaacgagttccgccgcatcgtctcc
accgtccagaagggcgagaaggaggcgagccgcgccaagaaggagatggtcgaggccaac
ctgcgtctcgtcatctccatcgccaagaaatacacgaaccgcggccttcagttcctggac
ctgatccaggagggcaacatcggcctgatgaaggcggtggacaagttcgagtaccggcgc
ggctacaagttctcgacctacgccacctggtggattcgtcaggcgatcacccgctcgatc
gccgaccaggcgcggaccatccgcatcccggtccacatgatcgagacgattaacaagctg
gtccgcaccagccgccagatgctgcacgagatcggccgcgagccgaccccggaggagctg
gccgagcgtctgatgatgccgctggagaaggtgcgcaaggtcctgaagatcgccaaggag
ccgatctccctcgaaacgccgatcggcgacgaggaggattcgcatctcggtgatttcatc
gaggacaagaacgcggtcctgccgctggacgcggccatccaggccaacctgcgcgagacg
acgacccgcgttctggcctcgctgacgccgcgcgaggagcgtgtcctgcgcatgcgcttc
ggcatcggcatgaacaccgaccatacgctggaagaggtcggccagcagttcaacgtcacc
cgcgagcgcatccgccagatcgaggcgaaggctctgcgcaagctgaagcacccgtcgcgg
tcgcgcaagctgcgcagcttcctggatacctga
DBGET
integrated database retrieval system
