Azospirillum sp. B510: AZL_021320
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Entry
AZL_021320 CDS
T01169
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
azl
Azospirillum sp. B510
Pathway
azl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZL_021320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azl03019
]
AZL_021320
Messenger RNA biogenesis [BR:
azl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZL_021320
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
BAI72770
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Position
complement(2438484..2440169)
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AA seq
561 aa
AA seq
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MSEAPADSFVPEEDALYFLPLGGSGEIGMNLNLYGHRGKWLMVDLGISFADDTMPGLDVI
MPDPAFIAERRADLVGLVLTHAHEDHLGAVQYLWPELRCPVYCTPFTAAFLRAKLHEKGL
SSTVPIHEIPLGGTVEVGPFSVEYVTMTHSIPEPNALAIRTSAGTVLHTGDWKLDPDPLV
GETADEARLRAIGDEGVLALVGDSTNALVPGAAGSEATVRATLMELFGRYRDRRIAVSCF
ATNVARLESIAAAAAAHDRHVALVGRSLWRINEAARATGYLADVPKFLSEHDASYLPREK
LVLICTGSQGEPRSALARIAANDHPQVTLSRGDVVIFSSREIPGNERAIGRMQNQLVAQG
VELVTADEAAVHVSGHPARDELVRMYQWVRPRIAVPVHGEQRHQQAHAALAEDCQVAHSI
VPANGELLRLDGPEGARVVATVRAGRMAVDGKRLVPLDTGMMRARNRMVNNGAAVVTLVM
TATGELLTAPQLAVMGLVDEATDRDLLLDVVDAVRESVAMLPKSARADDAQVKEAARIAV
RRCFNASHGKKPVTEVHLVRV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccccggcggacagcttcgttccggaggaggatgcgctgtatttcctcccg
ctcggcggttccggcgagatcgggatgaacctcaacctctatggccaccgcggcaaatgg
ctgatggtggatctcggcatctccttcgccgacgacaccatgcccggcctggacgtcatc
atgccggacccggccttcatcgccgaacggcgggcggatctggtcgggctggtgctgacc
cacgcccatgaggaccatctgggcgccgtgcagtatctgtggccggagctgcgctgtccg
gtctattgcacgcccttcaccgccgccttcctgcgcgccaagctgcatgagaagggcttg
agcagcacggtgccgatccacgagatcccgctgggcggcacggtggaggtcggtcccttc
tccgtcgaatatgtcaccatgacgcattcgatcccggagccgaacgcgctcgccatccgc
acgtcggccggcacggtgctgcacaccggcgactggaagctggaccccgatccgctggtc
ggcgagacggccgacgaggcgcggctgcgcgccatcggcgacgagggggtgctggcgctg
gtcggcgacagcaccaacgccctggtgccgggggccgccgggtcggaggcgaccgtccgc
gccaccctgatggagttgttcgggcgttaccgcgaccgccgcatcgccgtcagctgcttc
gccaccaatgtggcgcggctggagagcatcgccgccgccgccgccgcccatgaccgccat
gtcgccctggtcggccgctcgctgtggcgcatcaatgaggcggcgcgggcgaccggctat
ttggcggatgtgccgaaattcctgtcggagcatgacgccagctatctgccgcgggagaag
ctggtgctgatctgcaccggcagccagggggagccgcgatcggccctcgcccgcatcgcc
gccaacgaccatccgcaggtgacgctgtcgcgcggcgacgtcgtgatcttctcctcgcgc
gagattcccggcaacgagcgcgccatcggccgcatgcagaaccagctggtcgcccagggg
gtcgagctggtgacggcggacgaggcggcggtccatgtctccggccatccggcgcgtgac
gagctggtgcgcatgtaccagtgggtgcggccgcgcatcgccgtcccggtccatggcgag
cagcgccaccagcaggcccatgccgccctggcggaggattgccaggtcgcccacagcatc
gtgccggccaatggcgagctgctgcggctcgacgggccggagggggcccgggtggtggcg
accgtgcgggccggccgcatggcggtcgacggcaagcggctggtgccgctcgacaccggc
atgatgcgggcgcgcaaccgcatggtgaacaatggcgccgccgtggtgacgctggtgatg
accgcgacgggcgagctgctcaccgcgccccagctggcggtgatggggctggtcgacgag
gcgaccgaccgcgacctgctgctggacgtcgtcgatgcggtgcgggaatcggtggcgatg
ctgccgaaatcggcgcgcgccgacgatgcccaggtcaaggaggcggcgcggatcgccgtc
cgccgctgcttcaacgcgtcccatggcaagaagccggtgacggaggttcatctggtccgc
gtctga
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