Azospirillum sp. B510: AZL_024880
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Entry
AZL_024880 CDS
T01169
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
azl
Azospirillum sp. B510
Pathway
azl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZL_024880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azl03019
]
AZL_024880
Enzymes [BR:
azl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AZL_024880
Messenger RNA biogenesis [BR:
azl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AZL_024880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Utp25_C
AAA_22
SUa-2TM
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
BAI73126
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All DBs
Position
2833266..2834804
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AA seq
512 aa
AA seq
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MTRTITSMTEFSGLGLIEPLLRAVAEEGYSTATPIQAGAIPLLLAGRDVLGLAQTGTGKT
AAFTLPILQRLFQNKKRVAAKSPRVLILTPTRELALQIGDSFTTYGRHLPIRRTVIHGGV
GQSPQVAAIARGVEVLIATPGRLLDLMAQNHVNLGAIEVFVLDEADRMLDMGFIRDVRKV
VAVLPKERQTLLFSATMPDAVVDLANSILTDAERIEVTPQSTTVERINQRVLFVERGDKR
RLLADLLEDEAMARTIVFARTKHGADRIADHLKKAGITADAIHGDKSQSARVRALESFRN
GELRALVATDIAARGIDIDGISHVINFDLPNEPESYVHRIGRTARAGTDGSAVSFCDHEE
VGYLKDIEKTIRQPIPADASHPYHAADVAQIHASSKPPPRPKAPGSNRNQNNRNQQQGRP
GNAAGNAAPKAAAPKPAPAQTKPAQTAAKAPQKAGKPAGGQRPDAARGDQNRHDRRPAPH
AVSHGNGGGKPAPRAAGTPGGNTPMRRKPSAA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaggaccatcacttccatgaccgaattttccggcctcggcctgatcgagcctctg
ctgcgcgccgtcgcggaagagggctactccacggccacgccgatccaggccggcgccatc
ccgcttctgctggccggccgcgacgtgctcggcctcgcccagaccggcaccggcaagacc
gccgccttcaccctgccgatcctgcaacggctgttccagaacaagaagcgcgtcgccgcc
aagtcgccccgcgtgctgatcctgacgccgacgcgcgagctggcattgcagatcggcgac
agcttcaccacctacggccgccatctgccgatccgccgcaccgtcatccatggcggcgtc
ggccaaagcccgcaggtcgccgccatcgcccgcggcgtcgaggtgctgatcgccaccccc
ggccgcctgctcgacctgatggcgcagaaccacgtcaacctcggcgccatcgaggtgttc
gtcctcgacgaggccgaccgcatgctcgacatgggcttcatccgcgacgtgcgcaaggtg
gtggcggtgctgccgaaggagcggcagaccctgctgttctccgccaccatgcccgacgcg
gtggtggatctcgccaacagcatcctgaccgacgccgaacgcatcgaggtgacgccgcag
tcgaccacggtggagcgcatcaaccagcgcgtcctgttcgtcgagcgcggcgacaagcgc
cgcctgctggccgatctgctcgaagacgaggcgatggcccgcaccatcgtcttcgcccgc
accaagcatggcgccgaccgcatcgccgaccatctgaagaaggccggcatcaccgccgac
gccatccatggcgacaagtcgcagtcggcccgcgtccgcgcgctggagagcttccgcaac
ggcgagctgcgggcgctggtggcgaccgacatcgccgcgcgcggcatcgacatcgacggc
atcagccacgtgatcaatttcgacctgccgaacgagccggaaagctacgtccaccgcatc
ggccgcaccgcgcgggccggcaccgacggcagcgccgtgtccttctgcgaccatgaagag
gttggctatctgaaggacatcgagaagacgatccgccagccgatcccggccgacgccagc
cacccctatcacgcggccgacgtggcgcaaatccacgcctcgtccaagccgccgccccgt
cccaaggcgccgggcagcaaccgcaaccagaacaaccgcaaccagcagcagggccgcccc
ggaaacgccgccggaaacgccgccccgaaggcggccgctcccaagcccgctcccgcccag
acgaagccggcgcagaccgccgccaaggccccgcagaaggccggcaagccggccggtgga
cagcgccccgacgccgcccgcggcgaccagaaccgccatgaccgccgtccggccccgcat
gccgtatcgcacggcaatggcggcggcaagccggcgccgcgtgccgccggcacccccggc
ggcaacacgccgatgcggcgcaagcccagcgccgcctga
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