Azospirillum ramasamyi: DM194_00650
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Entry
DM194_00650 CDS
T05500
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
azm
Azospirillum ramasamyi
Pathway
azm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM194_00650 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azm03019
]
DM194_00650 (recQ)
03400 DNA repair and recombination proteins [BR:
azm03400
]
DM194_00650 (recQ)
Enzymes [BR:
azm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM194_00650 (recQ)
Messenger RNA biogenesis [BR:
azm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM194_00650 (recQ)
DNA repair and recombination proteins [BR:
azm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM194_00650 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWU92906
UniProt:
A0A2U9S325
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All DBs
Position
146657..148585
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AA seq
642 aa
AA seq
DB search
MDSLFSYSNPGASDDAPGQHPATALDALRTVFGYDSFRGQQADIIDHVVRGGDALVLMPT
GGGKSLCYQIPALVRDGVTVVVSPLIALMRDQVTALRELGVRAAFLNSSLGPAEAREVER
AMVQGEIDLVYVAPERLVTPRFLDLLDRTRLALFALDEAHCVSQWGHDFRPEYLQLSILH
ERHPTVPRIALTATADVQTRAEIKDKLGLTDARVFLSSFDRPNITYRVVPKKSERQQMLA
FLREHHPEDAGIVYCMSRNKVEEVAAWLNQQGREALPYHAGLPAETREANQDRFIKSEGL
VMVATVAFGMGIDKPNVRFVCHLDPPKSLEAYYQETGRAGRDGLPANAWMAYGMADVVML
RQMLEQSEAGDSHRRVERGKLEALLGFCETPDCRRQVLLNYFNETLPEPCGNCDTCLDPV
ETWDGTIAAQKALSAVYRTGQRYGAGHLIDVLVGNATEKVMQQQHDRLKTFAVGKDLSKV
EWQSVYRQLVATGLLTVDLEGYGGFRLTDAGVAVIKGQRVVKLRKDPVLERRRGVHDALR
RHNARGGSAGGGLSGEGVSRSGARGALSAADDALWHALKDCRTALAKAQSVPPYVIFHDS
TLLEMVAQRPRDHAAFAHLPGVGGRKLERYADAFLEVIRQHG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtggattcgttgttttcctacagtaacccgggtgcgtcggacgatgcccccggtcaacac
ccggccacggcgctcgacgcgctgcggacggtgttcggctacgactccttccgcggccag
caggccgacatcatcgaccatgtggtgcgcggcggcgacgcgctggtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagatcccggcgctggtgcgcgatggggtgacggtg
gtggtttcgcccctgatcgccctgatgcgcgaccaggtgacggcgttgcgggaactgggc
gtgcgcgccgccttcctcaactcctccctgggtccggcggaggcgcgggaggtggagcgg
gcgatggtgcagggcgagatcgacctcgtctatgtggcgcccgaacggctggtgacgccg
cgcttcctcgatctgctcgaccgcacccggctggcgctgttcgcgctggacgaggcgcat
tgcgtgtcgcagtgggggcatgacttccggcccgaatatctgcagctgtcgatcctgcac
gaacgccacccgacggtgccgcgcatcgcgctgaccgcgaccgccgacgtgcagacccgc
gccgagatcaaggacaagctgggcctgaccgacgcgcgcgtcttcctgtccagcttcgac
cggcccaacatcacctaccgcgtggtgccgaagaagagcgagcgccagcagatgctggcc
ttcctgcgcgaacaccacccggaagacgccggcatcgtctattgcatgtcgcgcaacaag
gtggaggaggtcgcggcctggctgaaccagcagggccgcgaggctctgccctaccatgcc
gggctgccggccgagacgcgcgaggccaaccaggaccgcttcatcaagagcgaagggctg
gtgatggtcgccaccgtcgccttcggcatgggcatcgacaagccgaacgtccgcttcgtc
tgccacctcgacccgcccaagagcctggaggcctattaccaggagaccggccgcgccggc
cgcgacggcctgcccgccaatgcctggatggcctacggcatggccgacgtggtgatgctg
cgccagatgctggagcagtcggaggccggcgacagccaccgccgggtggagcgcggcaag
ctggaggcgctgctgggcttctgcgagacgccggactgccgccgccaggtgctgctgaac
tatttcaacgagacgctgccggagccctgcggcaactgcgacacctgcctggatccggtc
gagacctgggacggcaccatcgccgcgcagaaggcgctttctgcggtctaccgcaccggg
cagcgctatggcgccggacacctgatcgacgtgctggtcggcaacgccaccgagaaggtg
atgcagcagcagcatgaccggctgaagacctttgccgtcggcaaggatttgtcgaaggtc
gaatggcagtcggtctaccgccagcttgtcgccaccgggctgctgaccgtcgatctggag
ggctatggcggcttccgcctgaccgatgccggggtggccgtcatcaagggtcagcgggtg
gtcaagctgcgcaaggacccggtgctggagcgccgccgcggcgtccacgatgcgctgcgc
cgccacaacgcgcggggcgggtccgccggcggcgggttgagcggggagggcgtgtcgcgc
tccggcgcccgcggcgcgctgtcggcggccgacgacgccctgtggcatgcgctgaaggac
tgccggacggcgctggccaaggcgcagagcgtgccgccatacgtgatcttccacgacagc
acgctgttggagatggtggcccagcgcccccgcgaccacgccgccttcgcccatctgccg
ggggtgggcggccgcaagctggagcgctacgccgacgccttcctggaggtgatccggcag
cacgggtga
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