Azospirillum ramasamyi: DM194_07020
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Entry
DM194_07020 CDS
T05500
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
azm
Azospirillum ramasamyi
Pathway
azm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
azm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DM194_07020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azm03021
]
DM194_07020
03400 DNA repair and recombination proteins [BR:
azm03400
]
DM194_07020
Enzymes [BR:
azm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DM194_07020
Transcription machinery [BR:
azm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DM194_07020
DNA repair and recombination proteins [BR:
azm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DM194_07020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
AWU94033
UniProt:
A0A2U9S558
LinkDB
All DBs
Position
complement(1515324..1516340)
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AA seq
338 aa
AA seq
DB search
MLQKNWQELIKPSKLEIQPGDDADRFATVVAEPLERGFGLTLGNALRRILLSSLQGAAVT
AIHIDGVLHEFSSIPGVREDVTDIVLNIKTMGLRMGGDGPKRMRLRAEGPGEVKAGMIET
GPDIQVMDPELVICTLDNGARLNMELTVETGKGYVPASQNRPEDAPIGLIPIDALFSPVR
KVSYKVDNARVGQVTDYDRLSMTVETNGSVKPDDAVALAARILQDQLQLFINFEEPTHAV
SEEKHEEVPFNKNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEAEMLRTPNFGRKS
LNEIKEVLSQMGLHLGMEIPNWPPENIEELAKRLEEPY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcagaagaactggcaggaactgattaagccgagcaagctggagatccagcccggt
gacgacgccgaccgcttcgcgaccgtggtcgccgaaccgctggaacgcggcttcggtctg
acgctcggcaacgcgctgcgccgcatcctgctctcctcgctgcagggtgccgccgtcacg
gcgatccacatcgacggcgtgctgcacgagttctcgtccatccccggcgtccgcgaggac
gtgaccgacatcgtcctgaacatcaagacgatgggtctgcgcatgggcggcgacggcccg
aagcgcatgcgtctgcgcgccgaaggcccgggcgaggtcaaggccggcatgatcgagacc
ggtcccgatatccaggtcatggatccggaactggtcatctgcacgctggacaacggcgcg
cgcctgaacatggaactgacggtcgagaccggcaagggctatgtcccggccagccagaac
cgtccggaagacgcgcccatcggcctgattccgatcgacgccctgttctccccagtccgc
aaggtgtcctacaaggtcgacaatgcccgcgtcgggcaggtcaccgactatgaccgcctg
tcgatgacggtggagaccaacggttcggtcaagccggacgacgcggtggctctcgccgcc
cgcatcctgcaggaccagctgcagctgttcatcaacttcgaggagccgacgcacgccgtc
tccgaggagaagcacgaggaggttccgttcaacaagaacctgctccgcaaggtggacgag
ctcgagctgtcggtccgttcggccaactgcctcaagaacgacaacatcgtctacatcggc
gacctggtgcagaagacggaggcggaaatgctccgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtcccagatgggcctgcacctcggtatggaaatcccg
aactggccgccggagaacatcgaagagctggccaagcgtctggaagagccgtactaa
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