Azospirillum ramasamyi: DM194_08400
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Entry
DM194_08400 CDS
T05500
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
azm
Azospirillum ramasamyi
Pathway
azm00541
Biosynthesis of various nucleotide sugars
azm01100
Metabolic pathways
azm01250
Biosynthesis of nucleotide sugars
Module
azm_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
azm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DM194_08400 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
azm01005
]
DM194_08400 (rfaD)
Enzymes [BR:
azm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DM194_08400 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
azm01005
]
Core region
DM194_08400 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Shikimate_DH
KR
DAO
NmrA
adh_short
Ldh_1_N
ThiF
Motif
Other DBs
NCBI-ProteinID:
AWU94285
UniProt:
A0A2U9S3W0
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All DBs
Position
1804178..1805164
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AA seq
328 aa
AA seq
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MIVVTGGAGFIGSNLVAALAARGITDVAVIDRFRDGEKWQNLAKREVATLVPPEQTMAFL
DQHAAEIDTVFHLGAISATTERDVDKIVANNVALTLDLWRWCSWRGCRLIYASSAATYGD
GSAGFDDDGSCEGLARLRPLNAYGWSKHLVDRRVARAVATGDLLPPQWAGLKFFNVYGPN
EAHKGDMMSVVAKLYPQLTSGQPARLFKSHKDGFEDGGQLRDFIYVDDCVAVMLWLYDHP
EVGGLFNVGTGKARSFKDLALATFAALGLPPRIEYFDMPEHLRGKYQYFTQATTDRLRAA
GFDQPFTELEEGVRRYVQDFLSQPDPYR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtcaccggcggggccggcttcatcgggtccaaccttgtcgcggcgctggcc
gcgcgcggcatcaccgacgtggcggtcatcgaccgcttccgcgacggcgagaagtggcag
aacctcgccaagcgcgaggtcgcgacgctggtgccgcccgaacagacgatggccttcctc
gaccagcatgcggccgagatcgacaccgtcttccatctcggcgccatctccgccaccacc
gaacgcgacgtcgacaagatcgtggccaacaacgtcgcgctgacgctcgacctgtggcgc
tggtgttcctggcgcggctgccggctgatctacgcctcctccgccgccacctacggcgac
gggtccgccgggttcgacgatgacggatcctgcgaggggctggcgcggctgcgtccgctg
aacgcctatggctggtccaagcatctggtcgaccgccgcgtcgcccgtgccgtcgccacc
ggcgacctcttgccgccgcaatgggccgggctgaagttcttcaacgtctacggacccaac
gaggcccacaagggcgacatgatgagcgtggtcgccaagctgtatccgcagctgacgtcc
ggccagccggcgcgcctgttcaagtcgcacaaggacggcttcgaggacggcggccagctg
cgcgacttcatttacgtcgacgattgcgtcgcggtgatgctgtggctgtacgaccatccc
gaggtcggcggcctgttcaacgtcggcaccggcaaggcgcgcagcttcaaggatctcgcg
ctggccaccttcgccgcgctggggctgcccccccggattgagtacttcgacatgcccgag
catctgcgcggcaaataccaatatttcacgcaggcgacgacggatcgcctgcgcgccgcc
gggttcgaccagcccttcaccgagctggaagagggtgtccggcgctatgtgcaggatttc
ctgtcgcagcccgacccgtaccgctga
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