Azospirillum ramasamyi: DM194_11035
Help
Entry
DM194_11035 CDS
T05500
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
azm
Azospirillum ramasamyi
Pathway
azm02020
Two-component system
azm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
azm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DM194_11035 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DM194_11035 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azm03021
]
DM194_11035 (rpoN)
Transcription machinery [BR:
azm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DM194_11035 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
Dimerisation
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AWU94752
UniProt:
A0A2U9S5U9
LinkDB
All DBs
Position
complement(2347159..2348790)
Genome browser
AA seq
543 aa
AA seq
DB search
MALAQRLDLRQAQTLVMTPQLQQAIKLLQLSNIELSDFVDREIEQNPLLERDSGPADGGS
DPAGSDFGGDGAGGEAPGGLDGPGGMEANGLSIDGLNGRDDGPGPAPSDGRTRDTVEMTS
SDTLAASSEAPLDTDFENVYGDDRFSDGSDGGSEVYGAYGERGGRSGFDDDDSNLEATLT
SEKNLRDHLTEQLKIDLPDLGDQLIGLALIDMLDEAGWLVGFDAQAIAEQLGCGADRVER
VLAACQRFDPPGIFARSLKECLAIQLREKNRLDPAMAALLDNLELLAARNLPAIMKVCGV
DAEDVADMVADIRKLNPKPALAFDHTPAQLVTPDILMRPNPGGGWLIDLNPDTLPRVLVN
HRYFARISDSAKNKADKEYISERFQSANWLVKSLHQRATTILKVASEIIRQQDAFFIHGV
SHLRPLILRDIAEAIGMHESTVSRVTTNKFMATPRGVFELKYFFTSAIQGADGQAAHSAE
AVRHRIKTMIDAEKPEDVLSDDKLVEILRAEGIDIARRTVAKYREAMKIPSSVQRRRAKM
SRM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgctcaacgtctcgaccttcgacaagcccagaccctggtgatgacgccgcag
ctgcagcaggcgatcaagctgctgcagttgtcgaacatcgaactgtcggacttcgtcgac
cgcgagatcgagcagaacccgcttctggagcgcgacagcggcccggccgacggcggcagc
gatccggccggcagcgacttcggcggcgacggggccggcggcgaggcgccgggcgggctg
gacggtcccggcggcatggaggcgaacggcctcagcatcgacgggctgaacggccgcgac
gacgggccgggcccggccccatccgacgggcgcacccgcgacacggtggagatgacctcc
tccgacacgctggccgcttcgtcggaggcgccgctcgacaccgatttcgagaatgtctac
ggcgacgaccgcttttccgacgggtcggacggcggcagcgaggtctacggggcctatggc
gagcgcggcgggcgcagcggcttcgacgatgacgacagcaacctcgaagcgacgctgacc
agcgaaaagaacctgcgcgaccatctgaccgagcagctgaagatcgacctgcccgacctg
ggcgaccagctgatcgggctggccctgatcgacatgctggacgaggccggctggctggtc
ggcttcgacgcccaggcgatcgccgaacaactgggctgcggggcggaccgggtggagcgg
gtgctggccgcctgccagcgcttcgacccgccgggcatcttcgcgcggtcgctgaaggaa
tgcctcgccatccagctgcgcgagaagaaccggctggacccggcgatggcggcgctgctc
gacaacctggagcttctggccgcgcgcaacctgccggccatcatgaaggtctgcggcgtc
gatgccgaggacgtcgccgacatggtcgccgacatccgcaagctgaacccgaagccggcg
ctggccttcgaccacaccccggcccagctggtcacccccgacatcctgatgcgccccaat
cccggcggcggctggctgatcgacctcaacccggacacgctgccgcgggtgctggtcaac
caccgctatttcgcccgcatctccgacagcgccaagaacaaggccgacaaggaatacatc
tccgagcggttccagtcggcgaactggctggtcaagtcgctgcaccagcgcgccaccacc
atcctgaaggtggcgagcgagatcatccgccagcaggacgccttcttcatccatggcgtc
tcgcatctgcggccgctgatcctgcgcgacatcgccgaagcgatcggaatgcacgagagc
accgtcagccgcgtcaccaccaacaagttcatggcgaccccgcgcggcgtcttcgagctg
aaatacttcttcacctccgccatccagggtgcggacggccaggccgcccattccgcggag
gcggttcggcaccgcatcaagacgatgatcgatgccgagaagccggaggacgttctttcg
gacgacaaactggtggagattctccgtgccgaagggatcgacattgcgcgaaggacggtc
gcgaagtatcgtgaagctatgaaaataccgtcatcggtgcagcgacgccgtgccaagatg
tcacgcatgtag
DBGET
integrated database retrieval system
