Azospirillum ramasamyi: DM194_11745
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Entry
DM194_11745 CDS
T05500
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
azm
Azospirillum ramasamyi
Pathway
azm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM194_11745 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azm03021
]
DM194_11745 (rho)
03019 Messenger RNA biogenesis [BR:
azm03019
]
DM194_11745 (rho)
Transcription machinery [BR:
azm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DM194_11745 (rho)
Messenger RNA biogenesis [BR:
azm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DM194_11745 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
AWU94874
UniProt:
A0A2U9S5M7
LinkDB
All DBs
Position
2503653..2504909
Genome browser
AA seq
418 aa
AA seq
DB search
MHLQELKCKSPAELLAFAEELQIENASTLRKQDMMFAILKQLAENDIPIYGDGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIRSPKDGERYFALLKVNTIN
FDAPDKVRHRINFDNLTPLYPEERIRMEVEDPTKKNLTGRIVDLVAPLGKGQRGLIVAPP
RTGKTVMLQNIAHSVATNHPEAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLSDKRTFPAIDI
SKSGTRKEELLVDKGTMSKMWILRRILMPMGVTDAVDFLVDKLKHTKSNNEFFESMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaagagctgaagtgcaaaagccccgccgaactgctggcgttcgcggaggag
ctgcagatcgagaacgcgagcacgctgcgcaagcaggacatgatgttcgcgatcctgaag
cagctggccgagaacgacattccgatctacggcgacggcgttttggaggtgctgcaggac
gggttcggcttcctgcgctcgccggaagccaattatctgccgggtcccgacgacatttac
gtcagtcccagccaggtgcgccgcttcggcctgcgcaccggcgacacggtggaggggcag
atccgctcgcccaaggacggtgagcgctacttcgccctgctgaaggtcaacaccatcaat
ttcgacgcgcccgacaaggtccgtcaccgcatcaatttcgacaacctgacgccgctctat
ccggaggaacgcatccggatggaggtcgaagaccccaccaagaagaacctcaccggccgc
atcgtcgacctggtggcgccgctcggcaaggggcagcgcgggttgatcgtggcgccgccg
cgcaccggcaagacggtgatgctgcagaacatcgcccactcggtcgccaccaaccacccc
gaagcctatctgatcgtcctcctgatcgacgagcgtccggaagaagtgacggacatggcc
cgctcggtccgcggcgaggtcatcagctccaccttcgacgaaccggccacccgccacgtc
caggtcgccgaaatggtgatcgagaaggccaagcggctggtcgagcacaagcgcgacgtg
gtcatcctgctggacagcatcacccgtctggcccgcgcctacaacacggtggtgccgagc
tccggcaaggtgctgaccggcggtgtcgacgccaacgccctgcagcggcccaagcgcttc
ttcggcgccgcccgcaacgtggaggagggcgggtcgctcaccatcatcgccaccgcgctg
atcgacaccggcagccgcatggacgaggtgatcttcgaagagttcaagggcaccggcaac
tcggagatcgtgctggaccgcaagctctccgacaagcgcaccttcccggccatcgacatc
tccaagtcgggcacccgcaaggaggagctgctggtcgacaagggcaccatgtcgaagatg
tggatcctgcgccgcatcctgatgccgatgggcgtgaccgacgcggtcgacttcctggtc
gacaagctgaagcacaccaagtcgaacaacgagttcttcgagagcatgaaccagtag
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