Azospirillum ramasamyi: DM194_11880
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Entry
DM194_11880 CDS
T05500
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
azm
Azospirillum ramasamyi
Pathway
azm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM194_11880 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azm03019
]
DM194_11880 (pnp)
03016 Transfer RNA biogenesis [BR:
azm03016
]
DM194_11880 (pnp)
Enzymes [BR:
azm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DM194_11880 (pnp)
Messenger RNA biogenesis [BR:
azm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DM194_11880 (pnp)
Transfer RNA biogenesis [BR:
azm03016
]
Prokaryotic type
tRNA degradation factors
DM194_11880 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AWU94898
UniProt:
A0A2U9SAA9
LinkDB
All DBs
Position
complement(2525379..2527490)
Genome browser
AA seq
703 aa
AA seq
DB search
MFTVHRKEIEWGGRKLVLETGKIARQANGAVLVTYGDTTVLCTAVAAKAPKPGVDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFADGFRNETQVICTVLSH
DLENDPDIVAMVGASAALTISGIPFLGPIGAARVGYKNGQYILNPTMDEVEDSDLDLVVA
GTTEGVLMVESEAKELTEEVMLGAVMFGHTNFQPVIEMIIDLAEEAAKEPWDLPEPAYDR
KALKARLRETVGSDVEAAYTEMVKQSRYEKVGAAKAKAIETLGEEFEPHAIGIEFKELEA
DILRGAILKTGRRIDGRDTKTVRPIVSEVGVLPRAHGSALFTRGETQALVVTTLGTSQDE
QIIDALEGEYREHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPLLPKKEDFP
YTLRVVSEVTESNGSSSMATVCGTSLSLMDAGAPLARPVAGIAMGLIKEDSGFAVLSDIL
GDEDHLGDMDFKVAGTEVGVTALQMDIKITSITEEIMEIALGQAKDGRLHILGEMAKALT
GAREGVNENAPRITVINIPKEKIRDVIGSGGKVIREIVEQTGAKIDIEDDGTVKVSAVDQ
KKSDAAIEWIKGIVAEPEMGVVYTGKVVKVVDFGAFVNFLGSRDGLVHISELAQQRVGKV
SDVVSQGDSVKVKVIGFDDRGKVKLSMKQVDQATGEDLSKKAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgttcaccgtaaagaaatcgaatggggcgggcgcaagctggtcctggaaacg
ggcaagatcgcccgtcaggccaacggtgctgttctggtcacctatggtgacaccaccgtc
ctctgcaccgccgtcgccgccaaggcgccgaagccgggcgtcgatttcttcccgctgacc
gtcaattaccaggaaaaggcgttcgccgccggtaagatccccggcggcttcttcaagcgc
gaaggccgtccgaccgagaaggaaacgctggtcagccgcctgatcgaccgtccgatccgt
ccgctgttcgccgatggcttccgcaacgagacgcaggtcatctgcaccgtgctgagccat
gacctggagaacgacccggacatcgtggcgatggtcggcgcctcggccgccctgacgatt
tccggcatccccttcctgggtccgatcggcgccgcccgcgtcggctacaagaacggccag
tacatcctgaacccgaccatggacgaggtcgaggacagcgatctggatctggttgtcgcc
ggcaccaccgaaggcgtgctgatggtcgaatcggaagccaaggagctgaccgaagaggtc
atgctgggcgccgtcatgttcggccacaccaatttccagccggtgatcgagatgatcatc
gatctggccgaggaagcggcgaaggagccgtgggatctgccggagccggcctatgaccgc
aaggccctgaaggcccgcctgcgcgagaccgtcgggtcggacgtcgaggccgcctatacc
gagatggtcaagcagtcccgctacgagaaggtcggcgccgccaaggcgaaggcgatcgag
actctgggcgaggaattcgagccccatgccatcgggatcgagttcaaggagctggaagcc
gacatcctgcgcggcgccatcctgaagaccggccgccgcatcgacggccgcgacaccaag
accgtgcgcccgatcgtctcggaagtcggtgtgctgccgcgcgcccacggttcggcgctg
ttcacccgcggcgagacccaggcgctggtcgtgaccacgctgggcaccagccaggacgag
cagatcatcgacgcgctcgaaggcgagtaccgcgagcacttcatgctgcactacaacttc
cccccgtattcggtgggtgaagccggccgcatgggcagcccgggccgccgcgagatcggc
cacggcaagctggcgtggcgcgccatccacccgctgctgccgaagaaggaagacttcccc
tacacgctgcgcgtcgtgtcggaagtcacggagtccaacggctcctcctcgatggccacc
gtctgcggcacctcgctgtcgctgatggacgccggcgcgccgctggcccgtccggtcgcc
ggcatcgccatgggcctgatcaaggaagacagcggcttcgccgtcctgtcggacatcctg
ggtgacgaagaccacctgggcgacatggacttcaaggtcgccggcaccgaggtcggcgtc
accgccctgcagatggacatcaagatcacctcgatcaccgaggagatcatggagatcgcg
ctgggccaggccaaggacggccgcctgcacatcctgggcgagatggccaaggcgctgacc
ggcgcccgcgaaggcgtcaacgagaacgccccgcgcatcaccgtgatcaacatcccgaag
gagaagatccgcgacgtgatcggctccggcggtaaggtgatccgcgagatcgtcgagcag
accggcgccaagatcgacatcgaggacgacggcaccgtcaaggtctcggccgtcgaccag
aagaagtcggatgccgccatcgagtggatcaagggcatcgtcgccgagccggagatgggc
gtggtctacaccggcaaggtcgtgaaggtcgtcgatttcggcgccttcgtgaacttcctg
ggctcgcgcgacggcctcgtccacatctccgaactggcgcagcagcgcgtcggcaaggtg
tcggacgtcgtgtcgcagggtgactcggtgaaggtcaaggtcatcggcttcgacgaccgc
ggcaaggtgaagctgtcgatgaagcaggtcgaccaggccaccggcgaggacctgagcaag
aaggcggagtga
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