KEGG   Azospirillum ramasamyi: DM194_12280
Entry
DM194_12280       CDS       T05500                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
azm  Azospirillum ramasamyi
Brite
KEGG Orthology (KO) [BR:azm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:azm02048]
    DM194_12280
Enzymes [BR:azm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DM194_12280
Prokaryotic defense system [BR:azm02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    DM194_12280
SSDB
Motif
Pfam: DEAD Cas3-like_C_2 HD ResIII Cas3_HD Helicase_C AAA_22 PhoH
Other DBs
NCBI-ProteinID: AWU94958
UniProt: A0A2U9SAG2
LinkDB
Position
2607077..2609383
AA seq 768 aa
MSAVVYAHSVPGRDEVLWEPLAAHLTKVADRAERLAATFGGQELARVMGALHDIGKARDA
FQSYIRGQGTSVDHSTAGAVIAERNYPAPYGRMMAYGIAGHHAGLANGCIAGSGLSSLKD
RLAAGAATLLPVRCLTPDLDIAPTSVALAAPVLSEGFTHEFSAAFLIRMLFSCLVDADRL
ETERFYADLLDEPVERGCTLTVTDLRDRLNAHLAQFEGRTSAVNSLRAEVLTAVRARADD
EPGLFSLTVPTGGGKTLSSLAFALDHAVRHGLRRVIYVIPFTSVVEQTAAVFRDALGSDD
AVLEHHSGFDFGPADGSAPDDEGKDGARKLRLAAENWDRPVVVTTAVQFFESLFSNRPSA
CRKLHAIAGSVVILDEAQTLPLKVLRPCLEALRELARGYRSSVVLCTATQPAVTTDAGFR
GGLDRVRELAPDPPDLYRRLKRVTVSTIAEPVSDEALAERLLNEPQALCIVNSRRHARDL
HRRIAVAEGARHLSTCLCAKHRRAELAAIRQDIKDGKTVRLVSTSLVEAGVDFSFPVVYR
AMAGLDSIAQAAGRCNRNGELPELGRVFVFDSPEDEGHRPPVELALFAQTAASVLRAHDD
PLALDTLRAYFRQVYWLRGDEDLDAAPVGEGPDAIRGILNALRLHRRKHDFPFADIAKAF
RIIESPLVPVIVPYRPAGEPDAVPRLLDALRHAPADKTGGIARALQPYLVQVPRSARAGL
LKAGAAECIRSGEFGDQFVALVNGDLYHPDVGLDWEDPTFRRFETSIF
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgagtgcagtggtatacgcgcattctgttcccggccgggatgaagtgctatgggagccg
ctggcggctcacctgaccaaggtcgccgatcgggcggagaggcttgctgccacgttcggc
ggccaagagcttgcacgagtcatgggcgcgctccatgacatcggcaaggctcgggacgca
ttccaatcctatatccggggccaagggacgagcgtcgaccattcgaccgcgggcgccgtc
atcgctgagcgcaactaccctgcgccgtatggccggatgatggcttatgggatcgccggc
catcatgccggactggccaacggctgcattgctggcagcggattatcgtcgctgaaagac
cggctggcagccggggccgctacgctcctgccggtacgctgtctgacgcctgacctcgac
attgcgccgacgtcggtcgctctggctgcgccggtgctgtccgaggggttcacgcacgag
ttctccgccgcctttctcattcgcatgctcttttcctgtctcgtcgatgccgatcggctg
gagacggagcgattttatgccgatctgcttgatgagccggtcgagcggggatgcacgctc
acggtcaccgatcttcgtgaccggctgaatgcgcatctggctcaatttgagggacggacc
agcgcagtcaatagtttgcgggcggaggtgctgactgcggttcgggcgagagcagacgat
gagccgggattgttctcgctgacggtaccgaccggcggcggcaagaccctgtcgtcgctg
gccttcgccttggaccatgcggttcggcatgggctgcggcgggtcatctatgtgatcccc
ttcacctccgtggtcgagcagacggcagcggtcttccgcgacgcgctgggcagcgacgac
gccgtgctcgaacatcacagcggtttcgatttcggaccggcggacggcagcgcgcccgac
gatgaaggcaaggacggtgcccgcaagctgagactcgccgctgaaaattgggaccggccg
gtggtcgtcaccaccgcggtgcagttcttcgaaagcctgttctctaaccgcccgtcggct
tgccggaagctgcatgccatcgccgggtcggtggtgatcctggacgaggcgcagaccttg
ccgctgaaggtgctgcggccatgtctggaggcgttgcgcgagctggcgcgcggctatcgc
agttccgtggttctgtgtacggcgacccagccggcggtgacgacggatgccggcttcagg
ggcgggctggacagggtgcgggaactggcgcccgacccgccggacttgtaccgccggctg
aaacgggtgacggtcagcaccatcgccgaaccggtgtccgacgaggcgcttgccgaacgg
ctgctgaacgaaccccaagcattgtgcatcgtcaacagccgtcggcatgcccgcgatctg
caccggcggatcgcagtggccgagggagcacgacatctgtccacctgcctgtgcgccaag
caccgccgggcggaattggcggccatccgccaggacatcaaggatggcaagaccgtccgg
ctggtttcgacctccctggtcgaggctggggtggatttcagctttcccgtcgtctaccgg
gcgatggccggcctcgactccatcgcccaagcggcgggccgctgcaaccggaacggcgag
ttgcccgagctggggcgcgtcttcgtcttcgacagcccagaggatgaaggccaccggccg
ccggtggagttggcgctgtttgctcagacagccgccagcgttctccgcgcccatgacgac
ccgctggctctcgacacgttgcgcgcctatttccggcaggtctactggctgcgtggcgac
gaggatctggacgctgccccggtgggggaggggccggacgccatccgcggcatcctgaac
gccttacgccttcatcggcgtaagcacgacttccccttcgccgacattgcgaaggcgttc
cggatcatcgagtcgccgctggtgccggtgatcgtaccctatcgtcctgccggtgagccg
gacgccgtcccgcgcctgctagacgccctgcgccacgctccggcggacaagaccgggggg
attgcccgcgccctgcagccctatctggtccaggttccccgttcggcccgtgccggcttg
ctgaaggccggggcggcggagtgcatccggagcggcgagttcggcgaccaattcgtcgcg
ctggtcaacggcgacctctaccaccccgacgtcgggctggattgggaggatcctaccttc
cggcggttcgaaaccagcattttttga

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