KEGG   Azospirillum ramasamyi: DM194_27650
Entry
DM194_27650       CDS       T05500                                 
Name
(GenBank) hypothetical protein
  KO
K03701  excinuclease ABC subunit A
Organism
azm  Azospirillum ramasamyi
Pathway
azm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:azm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DM194_27650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azm03400]
    DM194_27650
DNA repair and recombination proteins [BR:azm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DM194_27650
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DM194_27650
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_33 AAA_21 AAA_16
Other DBs
NCBI-ProteinID: AWU98067
UniProt: A0A2U9SH85
LinkDB
Position
unnamed6:10928..15121
AA seq 1397 aa
MSTRPTDRATPELQVVGADANNLRSVDCAFPVPGMTAIVGVSGSGKSSLLGDTVAAELIR
RDRLLFGLPHAGRTVPPVAAYVGPAPASLHVTQRPFRASARTTVATASGLLAELRHLFLA
DGRVLTPEGAEVSAPDPRTYAAWMKRHYRGTAAVWAIPMRWVAGDGVRAVRRLLDHDITS
ATLRGENDRLGSNGRVVDLTRWSPLRSKGEHLLEAEVGRIVVGPNTSNGDLEALIARAWA
IAGPDVMVELCDGFAGIDGPFGAVLDGARDRVHPDCRQLFLPPSLHLLSFNAPDHADSGA
CPRCLGLGRTSDVDEAALVPHPERSLREGAISLWSPTGYKHVNIQHETIEALTGRNDFWP
DLPWTRLPEAARTLLLNGTGDEPIQGIDPKTGRKKGAPRRFEGFRNAILRRWSSSATAAA
RLAHLVHEGSCPDCGGTRWSAKARALHAAGIGLAEWIALPMAALAERCVEVLDREPALLP
AGRQALERIGALARTLCRLGLGHIAGERGMTTLSDGEARRLQIGAVLALPVEQLVLLLDE
PARGLHETDLDTMIEVLRELARKHGVLLNEHRTKLVASADRVIRLGPGAGEQGGHILKDW
REPPPLATLRVAPPSGDFIEIRGATVHNVHSQDVTIPLGAVTAIVGVSGSGKSSFVRGVL
IPALESRGVPMLHGADPAEATAGTWAGARIDRPLAGVHVLHQRVPPRNRRSLVGTLTKAM
DALAEAFAQTALARAAGLSAEDFRLNSGNGRCPVCLGTGMVAEDGAAACCATCGGKRYRT
AALAPTVAGLDIAATLDCPAVALRRLWDEAGETALAVQLGPLCAAMEELGVGHLAFGRRV
DTLSGGEIQRLRVALTLAGGEAAEGHLFILDEPAAGLHREDAMRLNAVLRRMADGHRNTV
VLIEHNLDVVSDADWLVEFGEGAGENGGRVIAQAPPAAVASGDTPTGRSLRAAAERAPTR
RKPSPLLHAASPVPAVPVLELGRLVDGDLADCPAGDPTPAFERLLDPKRRLWEIADLNLE
FAKLLIDGVQATAAQDEAALLERWEAEPDAELAVNPLLPDLRQWGSHLPRSVMEAAFRRV
RQLALRVPGVWEPGRPGAARAMLDNAAGPANRRDRLRHALAVGGGYAELSRPAGTVLAAV
QRTPVDFERGLAGPARLTPTHVSRFLPEGQCPTCAGTGTVRTLNPDLVLAGARAAPDDPS
AYLRPEAAALMKGVWRAEFRPFLRRMAEEGLLEGDAAWIRSGHWQRPGHGSFLKTAKADP
DEVASWLRWDGLDTRLLAELPRSRHASWRAAVEASVHTAPCPACGGSGHGVAVRLLTFGG
RLLDAWIRSGTIGELCSALAATPVDRPRQRLTRDRVLGCFEPLVRSEPDTPLKAPAAAFR
TVAQEAMRRFTDLEYGA
NT seq 4194 nt   +upstreamnt  +downstreamnt
atgagcaccagacccactgaccgcgccacgccggaactccaggtcgtcggcgccgacgcc
aacaatctgaggtcggtggactgcgccttcccggttccgggcatgacggccatcgttggc
gtgtccggctccggcaagagttcgctgctgggcgacaccgtcgcggcggagctgatccgg
cgcgaccgtctcctcttcggcctgccgcacgccgggcggacggtgccgccggtcgccgct
tatgtcggcccagccccggcgtctctgcacgtcacgcaacgccccttccgcgcttcggcc
cgcacgaccgtggcgacggccagcggcctgcttgccgagctgcgccacctattcctggcc
gacgggcgtgtgctgacgccggagggggcggaggtgtccgcgccggaccccagaacctac
gccgcctggatgaagcgccattatcgcgggaccgccgccgtttgggcgattccgatgcgc
tgggtggccggcgacggggtgcgagcagtccgccgcctgctcgaccatgacatcaccagt
gccaccctgcgcggggagaacgaccgcctaggctcaaacggccgcgtcgtggaccttacg
cgctggagcccgctccgctcgaagggcgagcatctgctggaggcggaggtcggccgcatc
gtggtcggcccgaacacctccaacggcgatctggaagcgctgatcgcgcgggcctgggcc
atcgccggacctgacgtgatggtggagctgtgcgacggcttcgcgggcatcgacggcccc
ttcggcgcggtgctggacggcgcgcgcgaccgggtgcacccggattgccgccagctcttc
ctgccccccagcctgcacctgctgtccttcaacgcgcctgaccacgcggacagcggcgcc
tgcccgcgctgcctcgggctgggccgcaccagcgacgtggacgaggccgccctggttcca
cacccggagcgcagcctgcgcgagggcgccatcagcctgtggagccccaccggctacaag
cacgtcaacatccagcacgaaaccatcgaggcgctcaccggccgcaacgatttctggccg
gacctcccctggacacgcctgccggaggcggcgcgcacactcctcctcaacggcaccggc
gacgagcccatccagggaatcgaccccaagaccgggcgcaagaagggagcgccgcggcgc
ttcgaggggttccgcaacgccatcctgcgccgctggagcagctcggctacggctgccgcg
cggctcgcccacctcgtgcacgaaggctcctgcccggactgcggcgggacccgctggtcg
gccaaggcgcgcgcgctgcacgcggctgggatcgggctcgccgagtggatcgcccttccc
atggcggcgctggcggaacgttgcgtcgaggtgctggaccgcgaaccggcgctgttgccg
gccgggcgccaggcgctggagcgcatcggcgcgctggcgcgcacgctctgccgccttggc
ctcgggcacatcgccggcgagcgcggcatgacgacgctcagcgacggcgaagcgcggcgg
ctgcagatcggcgcggtgctggcgctgccggtggagcagctggtgctgctgctcgacgag
ccggcgcgcggccttcacgaaaccgacctcgacacgatgatcgaggttctgcgggagctg
gcgcgtaagcacggcgtgctgctgaacgagcatcggacgaaactcgtcgcctcggcggac
cgggtgatccgcctgggaccgggtgccggcgagcagggcgggcacatcctgaaggactgg
cgggagcccccgccgctggcaacgctgcgggtggcccctccctcgggcgactttatcgag
atccgcggcgccaccgtgcacaacgtccacagccaggacgtgaccatcccgctgggcgcc
gtgaccgccatcgtcggcgtctcggggtccggcaagtccagcttcgtgcgcggcgtcctg
atcccggcgttggagagccggggtgtgccgatgctgcacggcgccgatcccgcggaagcc
acggccgggacctgggctggcgctcggatcgaccggcccctggccggcgtccacgtgctc
caccagcgggttccgccccgcaaccggcgcagtctggtcggcaccctcaccaaggcgatg
gatgcgctggccgaagccttcgcgcagacggcgctggccagggcggccggcctgtcagcc
gaggatttccggctcaacagcggcaacggccgctgcccggtctgtttgggcaccggcatg
gtcgcggaggacggcgcggcagcctgctgcgcgacgtgcggcggcaagcgctaccgcacc
gcggcgcttgctccgacggtggcggggctggacatcgccgcaacgctcgactgtcccgcc
gtcgcgctgcgccggctctgggacgaggcgggggagacggcgctggccgtccagctcggg
ccgctgtgcgccgccatggaggagttgggcgtcggccatctggcctttggccgacgcgtc
gatacgctgagcggcggcgagatccagcgtctgcgcgtcgccctcacgctggcgggcggc
gaggcggcggaggggcacctcttcatcctggacgaaccggccgccggcctgcaccgtgaa
gacgccatgcgcctgaacgcggtgctgcgccgcatggcggacggccaccgcaacacggtg
gtgctgatcgagcacaatctggacgtggtctccgacgccgactggctggtggagttcggc
gaaggggcgggcgagaacggcggccgggtgatcgcccaggcgccgccggccgcggtggcc
agcggggacacccccaccggacgctcgctgcgggcggcggccgaacgggcgccgacacgg
cgcaagccctcccctcttctccacgccgcgtcccccgtcccggccgtgccggtgctggag
cttggacggctggtcgatggcgacctcgccgattgcccggccggagaccccacgccggcc
tttgagcgcctgctcgacccgaagcgccgcctttgggagatcgccgacctcaacctcgaa
ttcgccaagctgctgattgacggagtgcaggcgacggccgcgcaggacgaagccgccctg
ctggagcggtgggaggcggagcctgatgcggagctggcggtgaatccgctgctcccggac
ttgcgccagtggggcagtcacctcccgcgctcggtgatggaggccgccttccggcgcgtt
cggcagttggcattgcgggtacccggcgtctgggagcccggccggccgggtgccgcgcgt
gcgatgctggacaatgcggccgggccggcgaaccgccgcgaccggctgcgccacgcgctg
gccgtcggaggcggctatgcggagctgagccggccggccggcacggtgctcgccgccgtg
cagcgtacgcccgtggacttcgagcgtgggctggccggcccggcgcgcctgactccgacg
cacgtctcccggttcttgccggaggggcagtgccccacctgcgcagggaccggcaccgtc
cgcaccctcaaccccgacctcgtcctggccggcgcgcgggccgcgccggacgatcccagc
gcctatctgcgccccgaggcggccgccctcatgaaaggcgtctggcgcgctgagttccgc
ccctttctgcgacgcatggccgaggagggattgctggagggcgacgcggcctggatccgg
tccggccactggcagcgtcccggccatggcagcttcctgaagaccgccaaagccgatccc
gacgaggtcgcgtcctggctgcgctgggacggcctggacacgcggctcctggccgagttg
ccgcgcagccggcacgcaagctggcgcgccgcggtcgaggcgtcggtccacacggcgccc
tgccccgcgtgcggaggaagcggccacggcgtggccgtccggctgctgacgttcggcggg
cggctcctggacgcctggatacggtcaggcacaattggggagctgtgctctgccttggcg
gccacgcccgtggaccggccgcgccagcggctcacccgcgaccgcgttctggggtgcttc
gagccgctggtccgcagcgaaccggatacgcccttgaaagcgcccgccgcggccttccgg
accgtcgcgcaggaagccatgcggcgcttcaccgacctggagtacggcgcatga

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