Azospirillum ramasamyi: DM194_27650
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Entry
DM194_27650 CDS
T05500
Name
(GenBank) hypothetical protein
KO
K03701
excinuclease ABC subunit A
Organism
azm
Azospirillum ramasamyi
Pathway
azm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
azm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM194_27650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azm03400
]
DM194_27650
DNA repair and recombination proteins [BR:
azm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM194_27650
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM194_27650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_33
AAA_21
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AWU98067
UniProt:
A0A2U9SH85
LinkDB
All DBs
Position
unnamed6:10928..15121
Genome browser
AA seq
1397 aa
AA seq
DB search
MSTRPTDRATPELQVVGADANNLRSVDCAFPVPGMTAIVGVSGSGKSSLLGDTVAAELIR
RDRLLFGLPHAGRTVPPVAAYVGPAPASLHVTQRPFRASARTTVATASGLLAELRHLFLA
DGRVLTPEGAEVSAPDPRTYAAWMKRHYRGTAAVWAIPMRWVAGDGVRAVRRLLDHDITS
ATLRGENDRLGSNGRVVDLTRWSPLRSKGEHLLEAEVGRIVVGPNTSNGDLEALIARAWA
IAGPDVMVELCDGFAGIDGPFGAVLDGARDRVHPDCRQLFLPPSLHLLSFNAPDHADSGA
CPRCLGLGRTSDVDEAALVPHPERSLREGAISLWSPTGYKHVNIQHETIEALTGRNDFWP
DLPWTRLPEAARTLLLNGTGDEPIQGIDPKTGRKKGAPRRFEGFRNAILRRWSSSATAAA
RLAHLVHEGSCPDCGGTRWSAKARALHAAGIGLAEWIALPMAALAERCVEVLDREPALLP
AGRQALERIGALARTLCRLGLGHIAGERGMTTLSDGEARRLQIGAVLALPVEQLVLLLDE
PARGLHETDLDTMIEVLRELARKHGVLLNEHRTKLVASADRVIRLGPGAGEQGGHILKDW
REPPPLATLRVAPPSGDFIEIRGATVHNVHSQDVTIPLGAVTAIVGVSGSGKSSFVRGVL
IPALESRGVPMLHGADPAEATAGTWAGARIDRPLAGVHVLHQRVPPRNRRSLVGTLTKAM
DALAEAFAQTALARAAGLSAEDFRLNSGNGRCPVCLGTGMVAEDGAAACCATCGGKRYRT
AALAPTVAGLDIAATLDCPAVALRRLWDEAGETALAVQLGPLCAAMEELGVGHLAFGRRV
DTLSGGEIQRLRVALTLAGGEAAEGHLFILDEPAAGLHREDAMRLNAVLRRMADGHRNTV
VLIEHNLDVVSDADWLVEFGEGAGENGGRVIAQAPPAAVASGDTPTGRSLRAAAERAPTR
RKPSPLLHAASPVPAVPVLELGRLVDGDLADCPAGDPTPAFERLLDPKRRLWEIADLNLE
FAKLLIDGVQATAAQDEAALLERWEAEPDAELAVNPLLPDLRQWGSHLPRSVMEAAFRRV
RQLALRVPGVWEPGRPGAARAMLDNAAGPANRRDRLRHALAVGGGYAELSRPAGTVLAAV
QRTPVDFERGLAGPARLTPTHVSRFLPEGQCPTCAGTGTVRTLNPDLVLAGARAAPDDPS
AYLRPEAAALMKGVWRAEFRPFLRRMAEEGLLEGDAAWIRSGHWQRPGHGSFLKTAKADP
DEVASWLRWDGLDTRLLAELPRSRHASWRAAVEASVHTAPCPACGGSGHGVAVRLLTFGG
RLLDAWIRSGTIGELCSALAATPVDRPRQRLTRDRVLGCFEPLVRSEPDTPLKAPAAAFR
TVAQEAMRRFTDLEYGA
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagacccactgaccgcgccacgccggaactccaggtcgtcggcgccgacgcc
aacaatctgaggtcggtggactgcgccttcccggttccgggcatgacggccatcgttggc
gtgtccggctccggcaagagttcgctgctgggcgacaccgtcgcggcggagctgatccgg
cgcgaccgtctcctcttcggcctgccgcacgccgggcggacggtgccgccggtcgccgct
tatgtcggcccagccccggcgtctctgcacgtcacgcaacgccccttccgcgcttcggcc
cgcacgaccgtggcgacggccagcggcctgcttgccgagctgcgccacctattcctggcc
gacgggcgtgtgctgacgccggagggggcggaggtgtccgcgccggaccccagaacctac
gccgcctggatgaagcgccattatcgcgggaccgccgccgtttgggcgattccgatgcgc
tgggtggccggcgacggggtgcgagcagtccgccgcctgctcgaccatgacatcaccagt
gccaccctgcgcggggagaacgaccgcctaggctcaaacggccgcgtcgtggaccttacg
cgctggagcccgctccgctcgaagggcgagcatctgctggaggcggaggtcggccgcatc
gtggtcggcccgaacacctccaacggcgatctggaagcgctgatcgcgcgggcctgggcc
atcgccggacctgacgtgatggtggagctgtgcgacggcttcgcgggcatcgacggcccc
ttcggcgcggtgctggacggcgcgcgcgaccgggtgcacccggattgccgccagctcttc
ctgccccccagcctgcacctgctgtccttcaacgcgcctgaccacgcggacagcggcgcc
tgcccgcgctgcctcgggctgggccgcaccagcgacgtggacgaggccgccctggttcca
cacccggagcgcagcctgcgcgagggcgccatcagcctgtggagccccaccggctacaag
cacgtcaacatccagcacgaaaccatcgaggcgctcaccggccgcaacgatttctggccg
gacctcccctggacacgcctgccggaggcggcgcgcacactcctcctcaacggcaccggc
gacgagcccatccagggaatcgaccccaagaccgggcgcaagaagggagcgccgcggcgc
ttcgaggggttccgcaacgccatcctgcgccgctggagcagctcggctacggctgccgcg
cggctcgcccacctcgtgcacgaaggctcctgcccggactgcggcgggacccgctggtcg
gccaaggcgcgcgcgctgcacgcggctgggatcgggctcgccgagtggatcgcccttccc
atggcggcgctggcggaacgttgcgtcgaggtgctggaccgcgaaccggcgctgttgccg
gccgggcgccaggcgctggagcgcatcggcgcgctggcgcgcacgctctgccgccttggc
ctcgggcacatcgccggcgagcgcggcatgacgacgctcagcgacggcgaagcgcggcgg
ctgcagatcggcgcggtgctggcgctgccggtggagcagctggtgctgctgctcgacgag
ccggcgcgcggccttcacgaaaccgacctcgacacgatgatcgaggttctgcgggagctg
gcgcgtaagcacggcgtgctgctgaacgagcatcggacgaaactcgtcgcctcggcggac
cgggtgatccgcctgggaccgggtgccggcgagcagggcgggcacatcctgaaggactgg
cgggagcccccgccgctggcaacgctgcgggtggcccctccctcgggcgactttatcgag
atccgcggcgccaccgtgcacaacgtccacagccaggacgtgaccatcccgctgggcgcc
gtgaccgccatcgtcggcgtctcggggtccggcaagtccagcttcgtgcgcggcgtcctg
atcccggcgttggagagccggggtgtgccgatgctgcacggcgccgatcccgcggaagcc
acggccgggacctgggctggcgctcggatcgaccggcccctggccggcgtccacgtgctc
caccagcgggttccgccccgcaaccggcgcagtctggtcggcaccctcaccaaggcgatg
gatgcgctggccgaagccttcgcgcagacggcgctggccagggcggccggcctgtcagcc
gaggatttccggctcaacagcggcaacggccgctgcccggtctgtttgggcaccggcatg
gtcgcggaggacggcgcggcagcctgctgcgcgacgtgcggcggcaagcgctaccgcacc
gcggcgcttgctccgacggtggcggggctggacatcgccgcaacgctcgactgtcccgcc
gtcgcgctgcgccggctctgggacgaggcgggggagacggcgctggccgtccagctcggg
ccgctgtgcgccgccatggaggagttgggcgtcggccatctggcctttggccgacgcgtc
gatacgctgagcggcggcgagatccagcgtctgcgcgtcgccctcacgctggcgggcggc
gaggcggcggaggggcacctcttcatcctggacgaaccggccgccggcctgcaccgtgaa
gacgccatgcgcctgaacgcggtgctgcgccgcatggcggacggccaccgcaacacggtg
gtgctgatcgagcacaatctggacgtggtctccgacgccgactggctggtggagttcggc
gaaggggcgggcgagaacggcggccgggtgatcgcccaggcgccgccggccgcggtggcc
agcggggacacccccaccggacgctcgctgcgggcggcggccgaacgggcgccgacacgg
cgcaagccctcccctcttctccacgccgcgtcccccgtcccggccgtgccggtgctggag
cttggacggctggtcgatggcgacctcgccgattgcccggccggagaccccacgccggcc
tttgagcgcctgctcgacccgaagcgccgcctttgggagatcgccgacctcaacctcgaa
ttcgccaagctgctgattgacggagtgcaggcgacggccgcgcaggacgaagccgccctg
ctggagcggtgggaggcggagcctgatgcggagctggcggtgaatccgctgctcccggac
ttgcgccagtggggcagtcacctcccgcgctcggtgatggaggccgccttccggcgcgtt
cggcagttggcattgcgggtacccggcgtctgggagcccggccggccgggtgccgcgcgt
gcgatgctggacaatgcggccgggccggcgaaccgccgcgaccggctgcgccacgcgctg
gccgtcggaggcggctatgcggagctgagccggccggccggcacggtgctcgccgccgtg
cagcgtacgcccgtggacttcgagcgtgggctggccggcccggcgcgcctgactccgacg
cacgtctcccggttcttgccggaggggcagtgccccacctgcgcagggaccggcaccgtc
cgcaccctcaaccccgacctcgtcctggccggcgcgcgggccgcgccggacgatcccagc
gcctatctgcgccccgaggcggccgccctcatgaaaggcgtctggcgcgctgagttccgc
ccctttctgcgacgcatggccgaggagggattgctggagggcgacgcggcctggatccgg
tccggccactggcagcgtcccggccatggcagcttcctgaagaccgccaaagccgatccc
gacgaggtcgcgtcctggctgcgctgggacggcctggacacgcggctcctggccgagttg
ccgcgcagccggcacgcaagctggcgcgccgcggtcgaggcgtcggtccacacggcgccc
tgccccgcgtgcggaggaagcggccacggcgtggccgtccggctgctgacgttcggcggg
cggctcctggacgcctggatacggtcaggcacaattggggagctgtgctctgccttggcg
gccacgcccgtggaccggccgcgccagcggctcacccgcgaccgcgttctggggtgcttc
gagccgctggtccgcagcgaaccggatacgcccttgaaagcgcccgccgcggccttccgg
accgtcgcgcaggaagccatgcggcgcttcaccgacctggagtacggcgcatga
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