Azoarcus olearius BH72: azo0200
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Entry
azo0200 CDS
T00441
Symbol
sbcC
Name
(GenBank) exonuclease SbcC, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
azo
Azoarcus olearius BH72
Brite
KEGG Orthology (KO) [BR:
azo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azo03400
]
azo0200 (sbcC)
DNA repair and recombination proteins [BR:
azo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
azo0200 (sbcC)
Archaeal homologous recombinant proteins
azo0200 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
CAL92817
RhizoBase:
azo0200
UniProt:
A1K1W2
LinkDB
All DBs
Position
219193..222264
Genome browser
AA seq
1023 aa
AA seq
DB search
MKPLKLSLQAFGPFAGREEIDFTLLPEGALFLISGPTGAGKTSILDGITYALYGDTSGGE
RSAREMRSHHADAALLTEVEFEFALGARRYRVRRVPEQERAAQRATKSGDGLVKVLARAE
LHRLDDDGVTWLPLAHKTTEVTSELTALLGCQAEQFRQVVLLPQGQFRKLLTASSGEREK
ILETLFGTAAYKRLQDALKQEAQALQKAADETRLRRDTLLQQAAAESVEGLRGQAEALDA
ELTRLAGEESAARSADTAAQAALQQGRALAAQFAEQHAAGAALAAVEARAGEIAALRLRE
AAARRALQVVPADEACAGAGRQLALARQRAAEAGERVATAAAAMQQARAGLEADKARAPQ
RDTAQRELLQLEALAAQVEQLAAAERELAARRSQAAAAEQALAQARHAAAEAEQGRAALV
VRVDQLAPRAAEAEALALRVAQAEQREADAQRLAARRKALAEATAAEAQARQAMDAARAA
LDAARDAQQALDGLWREAQAAILARHLHDGAPCPVCGSAVHPGPATHAGELPSESALREA
AARSREAEQGFEARRAAFDRAAQARTAVEAEVGALSGALRTAGDDGVQADMLVETAADLR
QRLAVARQAGAELTAARDRLQALEQAQRNALAAQEQAATAAQSAASALHGAERVVEARRE
AVPAALRPAGALAAALKTARSALDTLLAASQQAQAAHAGAEAALAAAHAQRDTLAQAETE
QAAALEQAQAVFARALAAAAFDDEAGYRAARLAAADIDHLAASLRQHDEDAAAARERLAR
ADQAVAGRTPPQLAELETSAQAARAAIDAVLARSADLRGALEKTRHTLALLDELAARNAD
IEARYRITGELAAVANGDNGRNLTFQRYVLAALLDDVLRAASLRLKAMSRGRYLLQRREE
VADARRAAGLDLEVLDDYTGRARPVATLSGGEGFMASLSLALGLSDVVQAYAGGVQLDTL
FIDEGFGSLDPESLDMAMRTLIDLQRQGRMVGVISHVEEMKQQIDVAIEVVQGVRGSRVR
VRG
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctcaagctcagcctgcaggccttcggccccttcgccgggcgcgaggagatc
gacttcacgctgctgccggaaggggcgctgttcctgatctccggccccaccggcgccggc
aagacctccatcctcgacggcatcacctacgcgctgtatggcgacacctccgggggcgag
cgcagcgcgcgcgagatgcgcagccatcacgccgacgccgcgctgctcaccgaggtggaa
ttcgagttcgcgctgggcgcccgccgctaccgcgtgcgccgcgtgcccgagcaggaacgc
gccgcgcagcgcgccaccaagtcgggcgacggcctggtgaaggtgctggcgcgtgccgaa
ctccatcgtctggacgatgacggcgtcacctggctgccgctggcgcacaagaccaccgag
gtcaccagcgaactgaccgcgctgctcggctgccaggcggaacagttccgccaggtggtg
ctgctgccgcagggccagttccgcaagctgctcaccgccagctccggcgagcgcgagaag
atcctcgaaaccctgttcggtacggccgcctacaagcggctgcaggacgcgctcaagcag
gaggcgcaggcgctgcagaaggccgccgacgaaacccgcctgcggcgcgacaccttgctg
cagcaggcggccgccgagtcggtcgagggcctgcgcggccaggccgaagcgctggacgct
gaactgacgcggctggcgggcgaggaaagcgccgcgcgcagcgccgacaccgccgcgcag
gcggcgttgcagcaggggcgggcgcttgccgcccagtttgccgagcagcacgccgccggc
gccgcgctcgccgcggtcgaggcgcgcgccggcgagatcgccgcgctgcgcctgcgcgaa
gccgccgcgcgccgcgcgctgcaggtggtgccggccgatgaggcctgcgcgggtgccggg
cgccagctcgcgcttgcccgtcagcgcgcggccgaagccggcgagcgcgtcgccaccgcc
gcggcggcgatgcagcaggcgagggccgggctggaggccgacaaggcgcgcgcgccgcag
cgcgacaccgcccagcgcgagctgctgcagctggaagcgctcgccgcccaggtggagcaa
ctcgccgccgccgaacgcgaactcgccgcccgccgaagccaggccgccgccgccgagcag
gcgctggcgcaggcgcgccacgccgccgccgaggccgaacagggccgcgccgcgctcgtc
gtccgcgtcgaccagctcgcgccgcgcgccgccgaggcggaagcgctggcgctgcgcgtg
gcccaggccgaacagcgcgaagccgatgcccagcgccttgctgcccgccgcaaggcgctg
gccgaggccacggcggcggaagcgcaggcgcggcaggcgatggatgcggcgcgcgccgcg
ctcgacgccgcccgcgacgcccagcaggcgctcgatggtctgtggcgcgaggcgcaggcc
gccatcctcgcccgtcatctgcacgatggcgcgccctgcccggtgtgcggcagcgccgtc
catcccggccccgccacccacgccggcgagctgccttccgagagcgcgctgcgcgaagcc
gcggcgcgcagccgcgaagcggagcagggttttgaggcccgccgcgccgccttcgaccgc
gccgcgcaggcccgcaccgcggtggaggccgaagtcggcgccctctccggcgccttgcgt
accgcgggcgatgacggcgtgcaggccgacatgctggtcgaaaccgcggccgacctgcgt
cagcgcctcgcagtcgcgcgccaggcgggggcggaattgaccgcggcgcgcgaccggctg
caagcgctggagcaggcgcagcgcaatgcccttgccgcacaggagcaggccgccaccgcc
gcccagtccgccgcgagcgcgctgcacggcgcggagcgggtggtcgaggcccggcgcgag
gcggtgccggccgcactgcgtcccgccggcgcgcttgccgcggccttgaagaccgcccgc
agcgcgctcgacacgctgctcgccgcctcgcagcaggcgcaggccgcgcatgccggcgcg
gaggccgcgctcgcggccgcccacgcccagcgcgacacgctggcgcaggcggaaaccgag
caagcggcggcgctggagcaggcgcaggcggtgttcgcccgcgcgctcgccgccgccgct
ttcgatgacgaggcgggctaccgcgctgcccggctcgccgccgccgacatcgaccacctc
gccgccagcctgcgccagcacgacgaggatgccgccgccgcgcgcgaacgcctcgcccgc
gccgaccaggccgtcgccggccgtaccccgccgcagcttgccgagctggaaacctccgcc
caggccgcccgtgccgcgatcgacgcggtgctggcgcgcagcgccgacttgcgcggtgcg
ttggagaaaacccgccacaccctggccctgctcgacgaactcgcggcccgcaatgccgac
atcgaggcgcgctaccgcatcaccggcgaactcgcggcggtcgccaacggcgacaacggc
cgcaacctcaccttccagcgctacgtgctcgccgcgctgctggacgacgtgctgcgcgcc
gcctcgctgcggctgaaggcgatgagccgcggccgctacctgctgcagcggcgcgaggaa
gtcgccgacgcccgccgcgccgccgggctcgatctcgaagtgctggacgactacaccggc
cgtgcccgcccggttgccacgctctccggcggcgaaggcttcatggcctcgctatcgctc
gcgctcgggctctcggacgtggtgcaggcctacgccggcggggtgcagctcgacaccctg
ttcatcgacgaaggcttcggcagcctcgacccggaatcgctcgacatggcgatgcgtacc
ctgatcgacctgcagcgccagggccggatggtgggggtgatctcgcacgtcgaggagatg
aagcagcagatcgacgtcgcgatcgaggtggtgcagggggtgagggggagccgggtgcgg
gtgcgggggtga
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