Azoarcus olearius BH72: azo0504
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Entry
azo0504 CDS
T00441
Symbol
rpoN1
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
azo
Azoarcus olearius BH72
Pathway
azo02020
Two-component system
azo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
azo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
azo0504 (rpoN1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
azo0504 (rpoN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azo03021
]
azo0504 (rpoN1)
Transcription machinery [BR:
azo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
azo0504 (rpoN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_5
Sigma70_r4
HTH_Crp_2
MarR
Motif
Other DBs
NCBI-ProteinID:
CAL93121
UniProt:
A1K2R6
LinkDB
All DBs
Position
complement(541320..542780)
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AA seq
486 aa
AA seq
DB search
MKPTLQLKLSQHLTLTPQLQQSIKLLQLSTLELNTEIERFLLENPMLEREEMDGGGHDFQ
AQLSSGTTTASTTTESSGESGGEAESRADSAESGSFDEGMDWSSGSGSGSSSNRDDDDDV
DFQEFQAAGISLRDHLDQQVALSPLSDRDRALVRFLIEALDDDGYLHQELEELLELLPPE
LDVELDDLCIALKHVQSLEPAGIGARTPQECLALQLRAMPAEPVRDLALQIVSQHLELLA
ERNFAKLKKLTGCDDDALRAAHALICRLDPHPGAQHSVEETRYVLPDVVVRKLRGRWTVQ
LNPEAMPRLRINQLYASILQQNRGQGGGLTSQLQEARWLIKNVQQRFDTILRVSQAIVDQ
QRQFFDHGEVAMRPLTLREIADQLELHESTVSRVTTQKFMATPRGVFELKYFFGSHVATD
TGGAASSTAIRALIRQLVDAEDRKKPLSDARIAELLGQQGIVVARRTIAKYRESLNIPPV
SLRKTI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccacgctccaactcaagctctcccagcacctgacgctgacgccgcagttgcag
cagtcgatcaagctgctgcagctctccacgctcgaactcaacaccgagatcgaacgcttc
ctgctcgaaaacccgatgctcgagcgcgaggagatggacggcggcgggcacgacttccag
gcgcagctctcttccggcaccaccacggcctcgaccacgaccgaaagcagtggcgaaagt
ggcggcgaagcggagtcgcgcgccgacagcgcggaaagcggcagcttcgacgagggcatg
gactggtcgtccggctcgggcagcggctcgtcgagcaaccgcgacgacgatgatgacgtc
gattttcaggagttccaggccgcgggcatctcgctgcgcgaccatctcgaccagcaggtc
gcgctgtctccgctgtccgaccgcgaccgcgcgctggtgcgcttcctgatcgaggcgctc
gacgacgacggctacctgcaccaggagctggaagagttgctcgagctgctgccgcccgaa
ctcgatgtcgaactcgacgacctctgcatcgcgctgaagcatgtgcaaagcctcgagccg
gccggcatcggcgcccgcaccccgcaggaatgcctcgcgctgcagctgcgcgcgatgccg
gccgagccggtacgcgacctcgccctgcagatcgtcagccagcacctcgaactgctcgcc
gagcgcaacttcgccaaactcaagaaactcaccggttgcgacgacgacgcgctgcgcgcc
gcccacgcgctgatctgccggctcgatccgcatcccggcgcgcagcattcggtcgaggaa
acccgctacgtcctgcccgacgtcgtggtgcgcaagctgcgcgggcgctggaccgtgcaa
ctcaacccggaagcgatgccgcgcctgcgcatcaaccagctctacgccagcatcctgcag
cagaaccggggccagggcggcggcctgaccagccagctgcaggaggcgcgctggctgatc
aagaatgtgcagcagcgcttcgacaccatcctgcgtgtctcccaggccatcgttgaccag
caacggcagttcttcgatcatggggaggtggccatgcggccgcttacactccgggagatc
gcagaccagctcgagctgcacgaatccaccgtatcgcgcgtcaccacccagaagttcatg
gcgaccccgcgcggcgtgttcgaactcaagtatttcttcggcagccatgtcgccaccgat
accggtggcgcggcctcctccacggcgattcgcgcgctgattcgccagttggtggatgcc
gaggacaggaagaaacccctgtccgacgcccggattgccgaattgttgggccagcagggt
atcgtggtcgccaggcggaccatcgccaagtatcgcgaatcgctcaatatcccgccggtc
agtctgcgcaaaacgatctaa
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