Azoarcus olearius BH72: azo2122
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Entry
azo2122 CDS
T00441
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
azo
Azoarcus olearius BH72
Pathway
azo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
azo2122 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azo03019
]
azo2122 (deaD)
03009 Ribosome biogenesis [BR:
azo03009
]
azo2122 (deaD)
Enzymes [BR:
azo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
azo2122 (deaD)
Messenger RNA biogenesis [BR:
azo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
azo2122 (deaD)
Ribosome biogenesis [BR:
azo03009
]
Prokaryotic type
rRNA helicases
azo2122 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
T7SS_ESX_EspC
HEM4
UvrA_inter
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAL94739
UniProt:
A1K7D4
LinkDB
All DBs
Position
2327305..2329257
Genome browser
AA seq
650 aa
AA seq
DB search
MTDTVTFADLALPAPLLQALADVGYETPSPIQAACIPHLLAGHDILGEAQTGTGKTAAFA
LPMLARLDLADRRPQVLVLTPTRELAIQVAEAFQKYAHHLRDFHVLPLYGGQSMVVQLRQ
LSRGAQIIVGTPGRVMDHLERGSLKLDTLSGLVLDEADEMLRMGFIEDVEWILEHTPSGR
QTALFSATMPDAIRRVAHQHLREPKEVKIRAATSTVSAISQRYWLVRGVDKLDALTRILD
AEEKLDAAIVFVRTKTATTELADKLEARGYAAAALNGDMTQGLRERVIEQLKNGSLDIVV
ATDVAARGIDVPRISHVINYDIPYDTEAYVHRIGRTGRAGREGSAILFVAPRESRMLKAI
ERATRQPIEAIALPSREEVAGRRVAQFKQLVLDTLQQEDLGFFMEVVNGLVDEHEIDAHE
IAAALAFLAQRDKPLQVEESGRGWDIATAPERDRRPPRETVRDGMREERGEREPRPNRDE
ILSRRRAFADGALVRYRIAVGRNQGATPKEIVGAIANEGGIEGKYIGQIHLFDDYSTVEL
PASLPGELLGLLKRTRVRQCALDIRPLTEAEAASTPARRPRRDAGDAPERTKRPYDERRP
RDNDRPQSKSYDKPYDKPHAKTERAPYPPKSGEKPRPAGGDKPWKRKDKR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgacagataccgtcaccttcgccgatctcgccctgcccgccccgctgctgcaagccctt
gccgacgtcggctatgaaacgccttcgccgatccaggccgcctgtattccgcacctgctc
gcgggccacgacatcctcggcgaggcgcaaacgggaaccggcaagacggccgcgttcgcg
ttgccgatgctggcacggctcgacctcgccgaccgccgtccgcaggtgctggtgctgacg
ccgacgcgcgaactcgcgatccaggtggccgaagcgttccagaagtatgcgcatcacctg
cgcgacttccatgtgctgccgctgtatggcggccagagcatggtggtgcagctgcgccag
ctgtcgcgcggcgcgcagatcatcgtcggcaccccggggcgcgtcatggaccacctcgaa
cgcggcagcctcaagctcgacacgctgtccggcctggtgctcgacgaggccgacgagatg
ctgcgcatgggcttcatcgaggacgtcgagtggatcctcgaacacacgccgtcaggccgc
cagaccgcgctgttctccgccacgatgccggacgcgatccgccgcgtcgcccatcagcac
ctgcgcgaaccgaaggaagtgaagattcgcgcggccaccagcaccgtgtcggcgatcagc
cagcgctactggctggtgcgcggcgtggacaagctcgacgccctgacccgcatcctcgac
gccgaggaaaagctcgacgccgcgatcgtgttcgtgcgcaccaagaccgccaccaccgaa
ctggcagacaaactcgaggcgcgtggctatgcggccgccgcgctcaatggcgacatgacg
cagggcctgcgcgaacgcgtcatcgagcagctgaagaacggctcgctcgacatcgttgtc
gccaccgacgtcgccgcgcggggtatcgatgtgccgcgcatcagccacgtcatcaactac
gacatcccttacgacaccgaagcctacgtgcaccgcatcggccgcaccggccgcgcaggg
cgtgaaggcagcgccatcctcttcgtcgcgccgcgcgaatcgcgcatgctgaaagcgatc
gagcgcgccacccggcagccgatcgaagcgatcgcactgcccagccgcgaggaagtcgcc
ggccgccgtgtcgcgcagttcaagcagctggtgctcgatacgctgcagcaggaggacctc
ggcttcttcatggaggttgtgaacggcctcgtcgacgaacatgagatcgacgcccacgag
atcgcggccgcgctcgccttcctcgcccagcgtgacaagcctttgcaggtggaggaaagc
ggccgcggctgggatatcgccaccgcgccggaacgcgatcgccgcccgccgcgcgagacc
gtgcgtgacggcatgcgcgaagagcgcggcgagcgcgaaccccgccccaaccgcgacgaa
atcctcagccgccgccgtgctttcgccgacggcgcgctggtgcgctaccgcatcgcggtc
ggccgcaaccagggcgcgacgcccaaggaaatcgtcggcgccatcgccaacgaaggcggc
atcgagggcaagtacatcggccagatccacctcttcgacgactacagcaccgtcgaactg
cccgccagcctgcccggcgaactgctgggcctgctcaagcgcacccgcgtgcgccagtgc
gcgctcgacatccgcccgctgaccgaggccgaagccgcctccacgccggcacggcgcccg
cgccgtgatgccggcgacgccccggagcgcaccaaacgcccctacgacgaacgccgtccg
cgcgacaacgaccggccccagagcaaatcgtacgacaagccctacgacaaaccccacgcc
aagacggagcgcgcgccctacccgcccaagtccggcgaaaagccgcgcccggccggcggt
gacaagccctggaagcgcaaggacaaacgctga
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