Azoarcus olearius BH72: azo3000
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Entry
azo3000 CDS
T00441
Symbol
ycbB
Name
(GenBank) putative periplasmic protein
KO
K21470
L,D-transpeptidase YcbB
Organism
azo
Azoarcus olearius BH72
Brite
KEGG Orthology (KO) [BR:
azo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
azo01002
]
azo3000 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
azo01011
]
azo3000 (ycbB)
Peptidases and inhibitors [BR:
azo01002
]
Cysteine peptidases
Family C82
azo3000 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
azo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
azo3000 (ycbB)
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CAL95616
UniProt:
A1K9W1
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All DBs
Position
complement(3297392..3299023)
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AA seq
543 aa
AA seq
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MKAPALSVRAPRALRRVFAAWLCGVALLASAPAQTVAAPEEGVAPSWFAHGRPVPAARQA
VDILAAAAAEGLDPADYDAGALRAQLDALGRGTAPETQAAFDAALSAAMARYLGDVHRGR
IDPRSVHAAYAGPAPEAFDADAYLRAALAEDRVEEAARAAVPPLPLYGALRTALAHYRTL
AAGADAQAAWSLPLPLPPRRKLEPGQPYAGLALLARRLTLLGDLVADVPLPPRYEGALVD
AVKRFQLRHGLAADGVVGRGTLAELEVAPAARVRQIELTMERLRWTPLLQAPRMIVVNVP
EFMLRAYEVRDGRIEVAARMKVIVGKALDTRTPLFAEDMRFIEFSPYWNVPPSIARAELV
PRLRREPGYWNAQGFEFVAGDGTANPTLSTAGLDAVLRGTLRIRQRPGPHNALGDIKFVF
PNNDNIYLHHTPTPQLFARDRRDFSHGCIRVEAPVELARFVLRDQPEWDEARIREAMSAG
SSKTIRVATPLPVLIAYGTAMVDAEGHAHFFRDIYGHDQLLHDTLLRRSRGNSPVAVEGG
RAQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcccgccttgtccgtgcgcgccccccgcgcgcttcgccgcgtgttcgccgcc
tggctgtgcggcgttgcgctgctcgccagcgcgccggcgcagactgtcgccgcgccggag
gagggcgtggcgccgtcgtggttcgcgcacggccggcccgtgcccgccgcgcggcaggcg
gtggacatcctcgccgccgccgcggccgaagggctggaccccgcggactacgacgccggg
gcgctgcgcgcgcaactggacgcgctggggcggggcaccgcgccggaaacccaggccgcg
ttcgacgccgcgctcagcgccgcgatggcgcgctatctgggtgatgtgcaccgcggccgc
atcgacccgcgcagcgtccatgcggcgtacgccggccccgcgccggaggccttcgacgcc
gacgcctatctgcgcgccgcgctggcggaggaccgggtggaagaggccgcgcgcgcggcg
gtgccgcccttgccgctgtatggcgcgctgcgcacggcgctggcgcactaccggacgctg
gccgcgggggcggacgcgcaggcggcgtggtcgctgccgctgcccttgccgccgcggcgc
aagctcgaacccggccagccctatgccggcctcgccttgctggcgcgccggctgacgctg
ctcggcgatctcgttgccgacgtgccgctgccgccgcgctacgaaggcgcgctggtggat
gcggtcaagcgcttccagctgcgccacggcctggcggcggacggcgtggtcgggcgcggc
acgctggccgagctggaggtggcgccggcggcgcgcgtgcgccagatcgagctgaccatg
gagcgcctgcggtggacgccgctgctgcaggcgccgcgcatgatcgtggtgaacgtgccg
gagttcatgctgcgcgcctacgaggtgcgcgacggccgcatcgaggtcgcggcgcgcatg
aaggtcatcgtcggcaaggcgctcgatacccgcacgccgctgttcgccgaggacatgcgc
ttcatcgagttcagcccctactggaacgtgccgccgtcgatcgcgcgcgccgagctggtg
ccgcgcctgcgccgcgaacccggctactggaacgcgcagggcttcgagttcgtggccggc
gacggcaccgccaacccgacgctgagcaccgccgggctggacgccgtgctgcgcggcacg
ctgcgcatccgccagcgcccggggccgcacaacgcgctcggcgacatcaagttcgtgttc
cccaacaacgacaacatctacctgcaccacacgccgacgccacagctcttcgcgcgcgac
cggcgcgacttcagccacggctgcatccgcgtggaggcgccggtggaactcgcgcgcttc
gtgctgcgcgaccagcccgaatgggacgaggcgcgcatccgcgaggcgatgagcgcgggc
agctcgaagaccatccgggtggcgacgccgctgccggtgctgatcgcctacggcacggca
atggtcgacgcggaaggccacgcccatttcttccgcgacatctatggccacgaccagttg
ctgcacgacacgctgttgcggcgcagtcgtggaaattcccctgttgcggtcgaaggcggg
cgggcacaatag
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