Azoarcus olearius BH72: azo3208
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Entry
azo3208 CDS
T00441
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase.
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
azo
Azoarcus olearius BH72
Pathway
azo03030
DNA replication
azo03430
Mismatch repair
azo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
azo3208 (dnaE1)
03430 Mismatch repair
azo3208 (dnaE1)
03440 Homologous recombination
azo3208 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azo03032
]
azo3208 (dnaE1)
03400 DNA repair and recombination proteins [BR:
azo03400
]
azo3208 (dnaE1)
Enzymes [BR:
azo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
azo3208 (dnaE1)
DNA replication proteins [BR:
azo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
azo3208 (dnaE1)
DNA repair and recombination proteins [BR:
azo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
azo3208 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
CAL95824
UniProt:
A1KAG8
LinkDB
All DBs
Position
complement(3532537..3536055)
Genome browser
AA seq
1172 aa
AA seq
DB search
MNAAHPAPHEPRFIHLRLHTEYSITDGIVQIDQAIAQAAADGMPAMGISDLANLFGMVKF
YKGARGKGVKPIIGVDAWIQNEAERDKPYRVLLICKSRKGYGQLCELLTQAYLENKYRGR
AEMRREWFENGAADELLCLSGAFFGDVGQAIVNGNIDLAERLAADWSRLFPGAFYIEIQR
AGHPGTETYIRHALQIANKLDLPVVATHPVQFLTPDDFQAHEARVCIAQGYVLADKRRPR
DFTEQQYLKSQDEMCALFADIPDALENAVEIAKRCSVTVQLGKNFLPLFPTPDGMTLDDF
LVQEAKKGLEERLVQLYPHPEEREKQRPRYEERLKFETDTIIQMGFPGYFLIVADFIQWG
KNNGVPVGPGRGSGAGSLVAYSLKITDLDPLEYALLFERFLNPERVSMPDFDIDFCQDNR
YRVIEYVRERYGKDAVSQIATFGTLASKAVVRDVGRVLDMPYGLCDRLSKLVPIEGAKPV
SLARAYEMEPQIGEMMKDGNDGEAVQTLWDLAQPLEGLTRGVGMHAGGVLIAPGKLTDFC
PLYIADGDDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELALDYVERLTGERVDLMSL
GFQDPAAYQILKDANTTAIFQVESDGMKKLLKKLAPDRFEDIIAVLALYRPGPLGSGMVD
DFILRKKGQQEIDYFHPDLKACLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGK
KKPEEMAKHRATIADGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVVTYHTAWL
KAHHCAAFMAATMSSDLDNTDTVKIFFEDTLANKIAILPPDVNESDYRFVPVDRKTIRYG
LGAVKGVGEPAVRAIIAARASGGAVKPYRDLFDFCERVDRRLVNRRVVEALIRAGAMDTL
EGHRGRDRAQVLATVPLAMEAAEQAAANALQGGLFDLVPEAAGAALEFADVRPWTERERL
KEEKTAIGFFLSGHPFNAFKPEVRRFVRRTLAQLEPSRDLVMMAGVVMEARVKMGNRGKM
MFVQIDDGTTPREVAVYSEVLDANRGKIVTDEVLVVEGKVSRDDFAGENGLRIIADRLMT
LGEARSRFARSLTLRVNGEAKNAPAAADRLQALLAPFREDGGGCPVRVCYGNGVAEGELP
LGERWRVRLEEALLDGLRGWLPANAVEVQYPN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcacatcctgctcctcacgagccccgcttcatccatctccgcctgcatacc
gaatactcgatcaccgacggtatcgtccagatcgatcaggcgatcgcgcaggctgccgcc
gacggcatgccggcgatgggcatctccgaccttgccaacctcttcggcatggtcaagttc
tacaagggcgcgcgcggcaagggcgtcaagcccatcattggcgtcgacgcctggatccag
aacgaggccgagcgcgacaagccctatcgtgtgctgctgatctgcaagagccgcaagggc
tacggccagctgtgcgaactgctgacccaggcctatctcgagaacaagtaccgcggccgc
gccgagatgcgccgcgaatggttcgagaacggcgctgccgacgaattgctgtgcctgtct
ggcgccttcttcggcgacgtcggccaggccatcgtcaacggcaacatcgacctcgcagaa
cggctggccgccgactggtcgcggctgtttcccggcgccttctacatcgagatccagcgc
gccggccatcccggcaccgagacctacatccgccacgcgctgcagatcgccaacaagctc
gatctgcccgtggtggccacccatccggtgcagttcctgacaccggacgacttccaggcc
cacgaggcgcgtgtctgcatcgcccaaggctatgtactggccgacaaacgccgcccgcgc
gacttcaccgagcagcaatacctcaagagccaggacgagatgtgcgcgctgttcgccgac
atcccggatgcgctggaaaacgcggtcgagatcgccaagcgctgctcggtgaccgtgcaa
ctcggcaagaacttcctgccgctgttccccacgcccgacggcatgacgctggacgacttc
ctggtccaggaggcgaagaaggggctggaggagcgtctggtccagctctatccgcatccg
gaagagcgcgaaaagcagcgcccgcgctacgaggagcggctcaagttcgagaccgacacc
atcatccagatgggcttccccggctacttcctgatcgtggccgacttcatccaatggggg
aagaacaacggcgtgccggtcggccccggccgcggttccggcgccggctcgctggtggcc
tattcgctgaagatcaccgacctcgatccgctggagtacgcgctgctgttcgagcgcttc
ctcaacccggagcgggtgtcgatgcccgacttcgacatcgacttctgccaggacaaccgc
taccgcgtcatcgaatacgtgcgcgagcgctacggcaaggacgcggtgagccagatcgcc
accttcggcacgctggcctccaaggcggtggtgcgtgacgtgggccgcgtgctcgacatg
ccttacggcctgtgcgaccgcctctccaagctggtcccgatcgaaggcgccaagccggtg
tcgctggcgcgcgcctacgagatggagccgcagatcggggagatgatgaaggacggcaac
gacggcgaggcggtgcagaccctgtgggatctggcccagccgctcgaaggcctgacccgc
ggtgtcggcatgcacgccggcggcgtgctgatcgcgccgggcaagctcaccgacttctgc
ccgctctacatcgccgacggcgacgacgccacgccggtgtcgcagttcgacaaggacgac
gtcgaagcggtcggcctggtgaagttcgacttcctcggcctgcgcaacctgacgattatc
gaactcgcgctcgactacgtggagcgcctgaccggtgagcgcgtcgacctgatgagcctg
ggcttccaggatcccgccgcctaccagatcctgaaggacgccaacaccacggcgatcttc
caggtggaatcggacgggatgaagaagctgctgaagaagctcgcacccgaccggttcgaa
gacatcatcgcggtgctcgcgctctaccgccccggcccgctcggttccgggatggtggac
gacttcatcctgcgcaagaagggccagcaggagatcgactacttccaccccgacctcaaa
gcctgcctggagccgacctacggcgtcatcgtgtaccaggaacaggtgatgcagatcagc
cagatcatcggcggctacaccctgggcggcgccgacatgctgcgccgggcgatgggcaag
aagaagccggaggagatggccaagcaccgcgccaccatcgccgacggcgccaagcagaag
ggctatgacccggcgctggcggagcaactgttcgacctgatgaccaagttcgcggagtac
ggcttcaacaagtcgcacaccgccgcctacgcggtcgtcacctaccacaccgcctggctg
aaggcccaccactgtgcggctttcatggcggcgacgatgtcgtccgacctggacaacacc
gacaccgtcaagatcttcttcgaggacaccctcgccaacaagatcgccatcctgccgccg
gatgtgaacgaatccgactaccgcttcgtgccggtggaccgcaagaccatccgctacggc
ctgggcgcggtgaagggcgtcggcgagccggcggtgcgcgcgatcatcgcggcgcgcgcg
agcggcggcgcggtcaagccctaccgcgatctgttcgacttctgcgagcgcgtggatcgc
cgcctggtgaaccggcgcgtggtcgaggcgctgatccgcgccggcgccatggataccctc
gaaggtcaccgcgggcgcgatcgtgcccaggtgctcgccaccgtgccgcttgcgatggag
gcggcggagcaagctgcggccaacgccctgcagggcggcctgttcgatctggtgccggag
gccgcgggcgcggcactcgaatttgccgacgtgcggccctggaccgagcgcgagcggctc
aaggaagaaaagaccgcgatcggcttcttcctgtccggccacccgttcaacgccttcaag
cccgaggtgcggcgtttcgtgcggcgcacgctggcccagctcgaaccctcgcgcgacctc
gtgatgatggccggcgtggtgatggaggcgcgggtcaagatgggcaaccgcggcaagatg
atgttcgtgcagatcgacgacggcaccacgccgcgcgaagtggcggtgtattccgaggtg
ctcgacgccaaccgcggcaagatcgtgaccgacgaggtgctggtggtcgaaggcaaggtc
agccgcgacgacttcgccggcgagaacggcctgcgcatcatcgccgaccgcctgatgacg
ctgggcgaggcgcgcagccgtttcgcccgcagcctcaccttgcgcgtgaacggcgaagcg
aagaacgccccggccgcggccgaccgcttgcaggcgctgctggcgcccttccgcgaggac
ggcggcggctgcccggtgcgtgtgtgctacggcaacggcgtggccgagggcgaactgccg
ctcggcgagcgctggcgcgtgcgcctggaagaggcgctgctcgatggtctgcgcggctgg
ctgccggccaacgcggtcgaggtgcagtacccgaactga
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