Azoarcus olearius BH72: azo3213
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Entry
azo3213 CDS
T00441
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
azo
Azoarcus olearius BH72
Pathway
azo03420
Nucleotide excision repair
azo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
azo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
azo3213 (uvrD)
03430 Mismatch repair
azo3213 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azo03400
]
azo3213 (uvrD)
Enzymes [BR:
azo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
azo3213 (uvrD)
DNA repair and recombination proteins [BR:
azo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
azo3213 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
azo3213 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAL95829
RhizoBase:
azo3213
UniProt:
A1KAH3
LinkDB
All DBs
Position
complement(3541853..3544072)
Genome browser
AA seq
739 aa
AA seq
DB search
MSNLLANLNEQQHQAVTLPSQHALILAGAGSGKTRVLTTRIAWLVQSGQASPAEILAVTF
TNKAAKEMHARLAAMLPINTRSMWIGTFHGLCNRLLRAHHRDAGLPQLFQILDSGDQLAA
IKRLLKTLNVDDEKFPPRELQHFINGQKEAGFRPHAVEAWDEFTRQRVQLYQEYEAQCQR
ESVVDFAELLLRTYELLERNEPIRRHYQRRFRHILVDEFQDTNVLQYRWLKLLADEGREG
GASLFCVGDDDQSIYRFRGAEVGNMRDFEREFRVQNVIRLEQNYRSRGNILDAANAIIRN
NSDRLGKNLWTDQGAGEPIRVFEAFSDADEARWLVDEVRGLVRDGALRSEIALLYRSNAQ
SRVLEHQLFTAGVPYRVYGGLRFFERQEIKHALAYLRLIANPDDDTAFARVVNFPTRGIG
ARSLEALQDAARTYNTSLYATVPHLSGKAGTVLAQFVRLVEDLRRDTARLPLPELIDHVL
DASGLRAHYKSEKEGQERLENLDELLGAGSNFVAEAQADAEVLAGDHALLADFLAHASLE
AGDHQADQGADAVQLMTVHSAKGLEFNVVFVSGLEEGLFPHENSILEAEGLEEERRLMYV
AVTRARERLYLSFAQSRMLHGQTRYNLRSRFLEEIPAGLVKWLTPPNPRSMAGGALAGMG
GGYFKPGASVAPVAARQARGTSAHLPNGLRIGQSVAHAKFGQGVIVAAEGSGSDAKVQIN
FGPAGVKWLLLAVAKLEPV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacctgcttgccaaccttaacgaacagcaacatcaggcagtcaccctgccatcc
cagcacgccctgatcctcgccggtgccggctctggcaagacccgcgtgttgaccacccgc
atcgcctggctggtgcagtcgggccaggccagcccggcggaaatcctcgccgtcaccttc
actaacaaggcggccaaggaaatgcatgcccgcctcgccgcgatgctgccgatcaacacc
cgcagcatgtggatcggcaccttccacggcctctgcaaccggctgttgcgggcccaccat
cgcgatgccggcttgccgcagctgttccagatcctcgattccggcgatcagctcgctgcg
atcaagcggctgctgaagacgctcaacgtcgacgacgagaaattcccgccgcgcgagttg
cagcacttcatcaatggccagaaggaagccggcttccgcccccacgcggtggaggcctgg
gacgaattcacgcgccagcgtgtacagctttaccaagagtatgaagcgcagtgccagcgc
gagtcagttgtggattttgcggagttgctgctgcgcacctatgagctgctggagcgcaac
gagccgatccggcggcactaccagcggcgcttccgccacatcctcgtcgatgagttccag
gacaccaacgtgttgcagtaccgctggctgaagttgctcgcggacgaaggtcgggagggg
ggcgcgtcgctgttctgcgtcggcgacgacgaccagtcgatctaccgcttccgcggcgca
gaggtcggcaacatgcgtgacttcgagcgagagttccgggtgcagaacgtgatccggctg
gagcagaactaccgttcccgcggcaacattctcgacgccgccaacgcgatcatccggaac
aactccgaccgcctcggcaagaacctgtggaccgaccagggcgcgggcgagccgatccgt
gtgttcgaggccttttccgatgccgacgaggcgcgctggctcgtcgacgaggtccgcggg
ctggtgcgcgacggcgcgctgcgcagcgagatcgcactgctgtaccgatccaatgcccag
tcgcgggtgctggagcatcaactgtttaccgccggggtgccctaccgggtgtatggcggc
ctgcgcttcttcgaacggcaggagatcaagcacgcgctcgcctacctgcgcctgatcgcc
aatcccgacgacgacacggcgttcgcgcgcgtggtcaacttccccacgcgcggcatcggc
gcgcggtcgctggaagcgctgcaggatgccgcgcgcacctacaacaccagcctgtacgcc
acggtgccgcacctgtcgggcaaggccggcacggtgctcgcgcagttcgtccgcctggtg
gaagacctgcgccgggacaccgcccgtctgccgttgcccgagctgatcgaccacgtgctc
gacgcgagcgggctgcgggcgcactacaaatccgaaaaggaagggcaggagcggctggag
aacctggacgaactgctgggcgcaggcagcaatttcgtcgccgaggcgcaagcggatgca
gaggtgctggccggcgaccacgccctgctcgcggacttccttgcccacgcctcgctcgaa
gcgggcgaccatcaggcagaccagggggccgacgcggtgcagttgatgaccgtgcattcg
gccaaggggctggagttcaacgtggttttcgtctcggggctggaggaaggcctgtttccg
cacgagaacagcattctcgaagccgaagggctggaagaggagcgccgcctgatgtacgtg
gcggtgacgcgggcacgcgagcgtctttacctctccttcgcgcagagccgcatgctgcac
ggccagacgcgctacaacctgcgctcgcgtttcctggaggaaatcccggccgggctcgtc
aagtggctgacaccgccgaatccgcgttcgatggcgggcggcgcgctcgccggcatgggc
ggcggctacttcaagccgggcgccagcgtggctccggtggcggcgcggcaagcgcggggc
acgtcggcgcatctgcccaacgggctgcgcatcggccagtcggtggcgcacgcgaagttc
gggcagggggtcatcgtcgctgccgagggcagcgggtcggacgcgaaggtgcagatcaac
ttcggccccgcgggcgtcaaatggctgctgctggcggtggcgaagctggagccggtgtaa
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