Azospirillum sp. TSA2s: E6C67_03025
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Entry
E6C67_03025 CDS
T10588
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
azp Azospirillum sp. TSA2s
Pathway
azp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E6C67_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azp03400
]
E6C67_03025
Enzymes [BR:
azp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E6C67_03025
DNA repair and recombination proteins [BR:
azp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E6C67_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
HHH_5
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
PIF1
HHH_2
UvrD-helicase
nSTAND3
NTPase_1
RsgA_GTPase
AAA_16
AAA_22
AAA_28
AAA_29
NACHT
HHH_3
AAA
T2SSE
SRP54
NPHP3_N
ABC_tran
TraI_hel_assoc_N
DEAD
AAA_17
cobW
SLFN-g3_helicase
NB-ARC
AAA_24
CbiA
ATPase_2
AAA_5
TrwB_AAD_bind
MeaB
Mg_chelatase
Pox_A32
ATP_bind_1
TsaE
AAA_14
MobB
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QCG92939
LinkDB
All DBs
Position
p3:complement(75357..77540)
Genome browser
AA seq
727 aa
AA seq
DB search
MSGQAIASSTESLAGLVERVTFHSADTGFCVLRVKVRGHRDLVVVVAHAAMISSGEWVQA
SGSWVNDRTHGLQFKATFLKATQPTTLEGIEKYLGSGMIKGIGPVYARKLVKAFGEAVFD
IIEAEPDRLREVTGIGPRRADRIIKGWADQRAIREIMLFLHANGVGTSRAVHIYKTYGQE
AIQLITENPYRLARDIRGIGFKTADQIAAKLGIEKTAMVRVRAGIGYALAEAMDGGHCGL
PVEDLEKLASDLLEVGTDLVAEALADELRDGAVIADQLEGRDCVFLAGLYRAEQAIAARL
RGLAGGTLPWPTIDMEKALEWVKGRTGLTLAPSQREAVRLALASKVMVITGGPGVGKTTL
VNSILKILAAKHIRILLCAPTGRAAKRLSESTGMEARTIHRMLAFDPAASGFKHNEENQL
ECDLLIVDETSMVDVPLMNALLKATPDRSALILVGDVDQLPSVGPGQVLADVIASGAVPV
VRLTEVFRQAAASRIIVNAHRINQGQMPDLAPVEGSDFYFVEAAEPEDGVRKLIEVVRNR
IPKRFGLDPVRDVQVLCPMNRGGLGARSLNVELQAVLNPPGDVRVERFGWTYCVGDKVMQ
TENDYEKEVYNGDLGVITALDPENSELLIDFDGREVAYDFGELDRVSLAYATTIHKSQGS
EYPAVVIPLAMQHWTMLRRNLVYTGVTRGKRLVVIVGQRKALGMAVRSRQEGRRWSKLKE
WLLARAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcaagccatcgcgtcatcgacggagtccctggccgggctggtggagcgcgtg
actttccacagcgccgacaccggcttctgcgtgcttcgggtaaaggtccgcgggcaccgc
gacttggttgtcgtcgttgctcatgccgccatgatctcatccggggaatgggtccaggca
agcggcagctgggtcaacgatcgcacccacggcctccagttcaaggccaccttcctgaag
gcgacccagccgacgacgctggagggcatcgagaagtacctgggctccggcatgatcaaa
ggcatcggcccggtctacgccaggaagctggtgaaggcgttcggcgaggcggtgttcgac
atcatcgaggccgaacccgaccgcctgcgcgaggtgacgggcatcgggcccaggcgggcc
gaccgcatcatcaaggggtgggccgaccagcgggcgatcagggagatcatgctgttcctg
cacgccaacggggtcgggacctccagggcggtccacatctacaagacctacgggcaggag
gcgatccagctgatcaccgagaacccataccggctggcccgggacatccgcggcatcggc
ttcaagacggccgaccagatcgcggccaagctgggcatcgagaagacggccatggtccgc
gtccgggcgggcatcggctatgccctggccgaggcgatggacgggggacactgcggcctg
ccggtggaggacctagagaagctggccagcgacctcctggaggtcggcactgatctggtg
gccgaggcgctggccgacgagcttcgtgacggcgccgtcatcgccgatcagctggagggc
agggattgcgtcttcctggccgggctgtaccgggccgagcaggccatcgccgcccggctg
cgagggcttgcgggcgggacgctgccctggcccaccatcgacatggagaaggcgctggag
tgggtgaagggtaggacgggactgacgctggcgccgagccagcgggaggctgtccggctt
gccctggcatccaaggtcatggtcatcaccggcggccccggcgtcggtaagacgaccctg
gtgaattccatcctgaagatcctggccgccaagcacatccgcatcctgctgtgcgccccg
accggacgggcggccaagcggctctcggagagcaccggaatggaagccaggaccatccac
cggatgcttgccttcgacccggctgccagtggcttcaagcacaatgaggagaaccaactg
gagtgcgatctactcatcgtcgacgagacgtccatggtggacgtgccgctgatgaacgcg
ctgctgaaggcgacccccgacaggtcagccctgatcctggtcggcgatgtcgatcagttg
ccgtcggtggggccggggcaggtgctggccgacgtgatcgcatccggcgccgtgcccgtg
gtgcgcctgaccgaggtgttccggcaggcggcggccagccgcatcatcgtcaacgctcat
cgcatcaaccagggacagatgccagacttagcaccggtcgaaggctcggacttctacttc
gtcgaggcggcagagcccgaggacggtgttcgcaagctcatcgaggtcgtcaggaaccgg
atcccgaagcgcttcggcctcgaccccgtccgcgatgttcaggtgctctgtccgatgaac
cgcggggggctcggcgcccggtcgttgaacgtggaactccaggcggtgctgaacccgccg
ggtgatgtccgggtcgagcgcttcggctggacctactgcgtcggcgacaaggtgatgcag
accgagaacgattacgagaaggaggtttacaatggggacctgggcgtcatcaccgcactt
gatcccgagaacagcgaactgttgatcgacttcgacggccgggaggtcgcttatgacttc
ggagaactcgaccgggtgtcgctggcctacgcgacaacgatccacaagagccagggctcg
gaatacccggccgtcgtcatcccgctggcgatgcagcactggacgatgctcaggcgcaat
ctcgtctataccggcgtcacccgtgggaagcgactggtcgtcatcgtggggcagcggaag
gcgctcggaatggcggtacgatcacgtcaggaagggcgccggtggtcgaagctgaaggag
tggctattggcaagagcagtctga
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