Azospirillum sp. TSA2s: E6C67_05440
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Entry
E6C67_05440 CDS
T10588
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
azp Azospirillum sp. TSA2s
Brite
KEGG Orthology (KO) [BR:
azp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azp03021
]
E6C67_05440
Transcription machinery [BR:
azp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E6C67_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
PhyR_sigma2
UPF0122
HTH_23
HTH_38
DUF742
WH2
HTH_28
HTH_Tnp_4
DUF134
GerE
Motif
Other DBs
NCBI-ProteinID:
QCG93388
LinkDB
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Position
5:complement(199594..200304)
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AA seq
236 aa
AA seq
DB search
MHPSSGERWIMQMADSRLDLLREESSVGRSMSGDLSRGPASGVIIPADEDSDEALMAQIR
AGSQTAYRRLVNRHLKRTYALARRLTGNEAEAEDVVQDAFLQVWQRRTQWSDDGGARFTT
WLYRVVVNRCIDHKRRPVGQDLETVAEPSDSAPDAVTTIHRRQVAARLLDAQNRLTPQQR
AAVTLFYYENLSNADIAAVMQISVGAVESLLKRARQQLRLLLRASAQAARDSFDDG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgtcgtcgggagaacgatggatcatgcaaatggcggactctcggcttgacctt
ctgcgggaggagtccagcgtcgggcgctccatgtccggggacctgagccggggtcccgcc
tccggtgtcatcatccccgcggacgaggacagcgacgaagcgctgatggcgcaaatccgc
gccggcagccagacggcttatcggcggctggtgaatcgccacctgaaacgcacctatgcc
ctggcccgccgcctgaccggcaacgaggcggaggccgaggatgttgtgcaggacgccttc
ctgcaggtctggcagcgccgcacccaatggagcgacgacggcggcgcccggttcacgacg
tggctctaccgcgtggtggtgaaccgctgcatcgaccacaagcgccggccggtcggccag
gatctggaaaccgtggcggagccgtcggacagcgcccccgacgcggtcaccaccatccat
cgccggcaggtcgccgcgcgccttttggatgcccagaacaggctgaccccgcagcagcgc
gccgcagtgacgctgttttattacgagaatttaagcaacgccgacatcgccgccgttatg
caaatcagcgtcggtgctgtagagtcgcttttgaaacgcgcgcgccagcaactccggctg
ctgctgcgcgccagtgcgcaggcggccagggattccttcgatgacggatga
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