Azospirillum sp. TSA2s: E6C67_10810
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Entry
E6C67_10810 CDS
T10588
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
azp Azospirillum sp. TSA2s
Pathway
azp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E6C67_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azp03400
]
E6C67_10810
Enzymes [BR:
azp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E6C67_10810
DNA repair and recombination proteins [BR:
azp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E6C67_10810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
PIF1
UvrD-helicase
nSTAND3
HHH_2
RsgA_GTPase
NTPase_1
AAA_28
AAA_22
AAA_16
AAA_29
HHH_3
NACHT
ABC_tran
NPHP3_N
T2SSE
AAA_24
DEAD
TrwB_AAD_bind
AAA
NB-ARC
MeaB
TraI_hel_assoc_N
cobW
Pox_A32
CbiA
SLFN-g3_helicase
SRP54
Mg_chelatase
AAA_5
AAA_17
ATPase_2
ATP_bind_1
TsaE
PhoH
AAA_14
MMR_HSR1
AAA_3
MobB
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QCG94416
LinkDB
All DBs
Position
2:complement(131090..133273)
Genome browser
AA seq
727 aa
AA seq
DB search
MSGQAIASSTESLAGLVERVTFHSAETGFCVLRVKVRGHRDLVVVVGHAAMISAGEWIQA
SGSWVNDRTHGLQFKTTFLKATQPTTLEGIEKYLGSGMIKGIGPIYARKLVKAFGEAVFD
VIEAEPSRLREVTGIGPRRADRIVKGWADQRAIREIMLFLHANGVGTSRAVRIYKTYGQE
AIQLITENPYRLARDIRGIGFKTADQIAAKLGIEKTAMVRVRAGIGYALAEAMDEGHCGL
PMEDLEKLASDLLEVDIDLVAEALADELRDGAVIGDQLEGRNCVFLAGLYRAEQAIAARL
RGLAGGTLPWPSIDMEKALEWVEGRTGLTLAPSQREAVRLALASKVMVITGGPGVGKTTL
VNSILKILAAKHTRILLCAPTGRAAKRLSESTGMEARTIHRMLAFDPAAGGFKHNEENRL
ECDLLVVDETSMVDVPLMNALLKATPDRSALILVGDVDQLPSVGPGQVLADVIASGAVPV
VRLTEVFRQAAASRIIVNAHRINQGQMPDLTPVEGSDFYFVEAAEPEDGVRKLIEVVLNR
IPKRFGLDPVRDVQVLCPMNRGGLGARSLNVELQAVLNPPGDVRVERFGWTYCVGDKVMQ
TENDYEKEVYNGDLGVITAMDPENSELLIDFDGREVPYDFGELDRVSLAYATTIHKSQGS
EYPAVVIPLAMQHWTMLRRNLVYTGVTRGKRLVVVVGQRKALGMAVRARQEGRRWSKLKE
WLLAKSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcaagccatcgcgtcatcgacggagtccctggcagggctggtggagcgtgtg
acctttcacagcgccgagaccggcttttgcgtgcttcgggtgaaggtccgcggacatcgg
gacttggttgttgtcgtcggccacgcggcgatgatctcggccggggaatggatccaggcg
agcggcagctgggtcaacgatcgcacccacggcctccagttcaagaccaccttcctgaag
gcaacccagccgacgacgctggaaggcatcgagaagtacttgggctccggtatgatcaag
ggcatcggccccatttacgccaggaagctggtgaaggcgttcggcgaggccgtgttcgac
gtcatcgaagccgagcccagtcgcctgcgcgaggtcacgggcatcgggcccaggcgggcc
gaccgcatcgtcaaaggatgggccgaccagcgggcgatcagggagatcatgctgttcctg
cacgccaacggcgtcggtacctccagggcggtccgcatctacaagacctacgggcaggag
gcgatccagctgatcaccgagaacccataccggctggcacgggacattcgcggcattggc
ttcaagacggccgatcagatcgcggccaagctgggcatcgagaagacggccatggtccgc
gtccgggcaggcatcggctacgcgctggctgaggcgatggacgaagggcactgcggcctg
ccgatggaggacctggagaagctcgccagcgacctcctggaggtcgacatcgatttggtg
gccgaggcgctggcggacgagcttcgtgacggcgccgtcatcggcgaccagttggaaggc
agaaactgcgtcttcctggccgggctgtatcgtgccgagcaggccatcgctgcccgtctg
cgggggcttgcgggcgggacactgccctggccttccatcgacatggagaaggcgctggag
tgggtggagggaaggacgggtctgacgctggcgccgagccagcgggaggctgtccggctt
gctctggcatccaaggtcatggtcatcaccggcggccccggcgtcggcaagacgacgctg
gtcaactccatcctgaagatcctggccgccaagcacacccgcattctgctctgcgccccg
accggccgggcggccaagcggctctcggagagcaccggaatggaggccaggaccatccac
cggatgcttgccttcgacccggctgccggaggcttcaagcacaatgaggagaaccggctg
gagtgcgacctgctcgtcgtcgacgagacgtccatggtcgacgtgccgctgatgaacgcg
ctgctgaaggcgacgcccgacaggtcggccctgatcctggtcggcgatgtcgaccagttg
ccgtcggtggggccggggcaggtgctcgccgacgtgatcgcatccggcgccgtgcccgtg
gtacgcctgaccgaggtttttcgacaggcggcggccagccgcatcatcgtcaacgcccat
cgcatcaaccaggggcagatgccggatctgacacccgtagagggctcggacttctacttc
gtcgaagcggcggagcccgaggatggtgttcgcaagctgatcgaggtcgttttgaaccgg
atcccgaagcgcttcggtctggaccccgtacgcgatgtccaggtgctctgtccgatgaac
cgcggaggcctcggcgcccggtcgctgaacgtggaactccaggcggtgctgaacccgcca
ggcgatgtccgggtcgagcgcttcggctggacctattgcgtcggcgacaaggtgatgcag
accgagaacgattacgaaaaggaggtctacaacggcgacctgggcgtcatcaccgcgatg
gatccggagaacagtgagctgctgatcgacttcgacggtcgtgaggttccctacgacttc
ggcgaactggatagggtatcgctggcctacgcgacgacgatccacaagagccagggctcg
gaatacccggccgtcgtcatcccgttggcgatgcaacattggacgatgctcaggcgcaat
ctcgtctacaccggcgtcacccgcgggaagcggctggtcgtcgtcgtgggccagcggaag
gcactcgggatggcggtgcgggcacgacaggaggggcgccggtggtcgaagctgaaggaa
tggcttctggcaaaatcggcctga
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