Azospirillum sp. TSA2s: E6C67_19505
Help
Entry
E6C67_19505 CDS
T10588
Name
(GenBank) DEAD/DEAH box helicase
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
azp Azospirillum sp. TSA2s
Pathway
azp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
azp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E6C67_19505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azp03400
]
E6C67_19505
Enzymes [BR:
azp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C67_19505
DNA repair and recombination proteins [BR:
azp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
E6C67_19505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
Helicase_C
UvrB_inter
CarD_TRCF_RID
ResIII
AAA_30
SecA_DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QCG96030
UniProt:
A0A4P7Z4I2
LinkDB
All DBs
Position
3:319842..323267
Genome browser
AA seq
1141 aa
AA seq
DB search
MLDGVPVADPSPDTPPPVPASSPATLSVQSEGELAIRLAALARRPGGVLLLARSDARATR
LARLVGDLFPDLDTVLLPIDETAAGDRAAPSRAVLGRRAAGLMRLAEGEAPASGRLVVAS
ADLALQRLPPPQAWAGGRFRLTRGMAYDETAWRGWFARTGYVLDDRVDEPGEVAIRGAVV
EVFPGDCDRPIRCDIADGIVRDLRLYDPVSQRSTETIDGITLGPVTDLIVGPEMLDRLAA
CLTGLGSALPDNLRRQLEEGRRPYGFDLQLPNVFDDCPLLLDLLPDAVVVMDAGARDRIE
ARADDLAEAGLDRRIRRDNSCLLPVPALERRLIDADALQKKLAARSVLPVEVKAGPPVEP
VRTERTLLRRAAALAGEGRAVLLAARSGTGSGEADRLAERASSVLGRPVPRLNRWPDPPL
AAGDCAVLPLRTADGFVCDGMTVLVAPRHGEDGGGATPTRPPLAPSELATGDFVVHLDYG
IGRLIGLETIAAADGDEEDSAADFLVLDYAHDDRLLVPTADFDRLWRHGSADTGAKLDSL
KNAHWLERRAVLEAEIAETAKGILREARRRAREIAPVIDPPADRMRRFGARFGFDPTEGQ
RRAVQAVLDAMRQGHPMDHLVCADVGYGKTEVALRAAAAVAFAGHQVAVMAPTSVLARQH
LDVFRRRFAGFGVTVEPLTGAMTKAEADRVRAGLADGSVDIVIGTHALLSKDVRFDRLGL
MVVDEEQRFGAAQKQALKQRTKGVHSLALSATPIPRTLQGALAGLRGLSIIDTPPARRRP
VRTAVTPRDPATARAALLRELGRGGQAFCVAPRIADLGELEAWIRELAPSARIAVAHGRL
GAAALDDAVMGFVDGESDILLATPIIESGIDIPRANTLLLFRPDLFGLGQLHQLRGRVGR
GAVQGYAYLLTDPAHPLEERAARRLGSLEVIESLGGGFVLSMLDLDQRGAGDLLGEDQSG
HLRAVGTELYQRILADSLRTLRRQPDDRWDPEVTVAVPHCIPSAYIPEEELRIGLHRRIA
RTREAGELDALREEMEDRFGPLPDPVERLLAIADLRCRCRAMGVASLGCGPAGVAVTLRG
DRAAAKAATLAKRSKGFLRARDDRLSAALEAPDADGRLTNAARVLDCIEAIVRKAQRRKR
G
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacggtgtccccgtcgccgatccgtcgcccgacacgccgcccccggttccggcg
tcgtctcccgccacattatccgtgcagagcgaaggcgaactggccattcggctggctgcg
ctcgcccgccggcccggcggtgtcctgctgctcgcccgcagcgacgcgcgcgccacccgg
ctggcgcggttggtgggtgacctgttccccgatctcgacaccgtcctgctcccgatcgac
gaaaccgccgccggtgaccgtgccgcaccatcgcgggccgtgctgggccgccgtgccgcc
ggcctgatgcgactggcggaaggggaagccccggcgtccgggcgactggtggtggcttcg
gccgatctggcactgcaacggttgccgccgccacaggcttgggcgggcggacgcttccgc
ctgacgcggggcatggcctatgacgagacggcgtggcgcggctggttcgcccgcaccggc
tatgtgctggacgaccgggtggatgaacccggcgaggtggcgatccgcggcgcggtggtg
gaggtcttccccggtgactgcgaccgcccgatccgctgcgacatcgccgacggcatcgtg
cgcgacctgcgcctctacgatccggtgtcccagcggtcgaccgaaaccatcgacggaatc
acattgggtccggtcaccgacctgatcgtcgggccggagatgctcgaccggctggccgca
tgccttaccggattggggtccgccctgccggacaatctgcggcggcagttggaggagggc
cggcgaccctacggcttcgaccttcagctacccaatgtcttcgacgactgtccgctgctg
ctggacctgctgccggatgcggtggtcgtgatggatgccggcgcgcgcgaccgcatcgag
gcgcgggccgacgatctggcagaggccggtctggaccggcgcatccgccgcgataattcc
tgcctgctgccggtcccggcactggaacgccggctgatcgatgccgatgcgctgcagaag
aaattggccgcccgctccgtgctgccggtcgaggtgaaggccggtcctcccgtggagccg
gtgcggaccgagcgcacgctgctgcggcgtgctgcggccttggccggcgagggcagggcc
gtgctgctcgccgcccgatccggcacggggtccggcgaggccgaccgattggcggagcgc
gcctcttcggtgttggggcgtccggtgccgcggctgaaccgctggcccgatccgccgctg
gcggcgggcgactgtgccgtgctgccgttgcggacggccgacggtttcgtctgcgacggc
atgacggtactggtggcgccacgccacggcgaggatggcggtggcgcgacgccgacccgg
ccgccgctggccccgtcggagctggcgaccggcgacttcgtcgtgcatctcgactatggc
atcggccgcctgatcggactggaaaccatcgccgccgccgatggcgacgaggaggactcg
gccgccgatttcctggtgttggactatgcccatgacgaccggctgctggtgccgaccgcc
gatttcgaccggctgtggcgccatggctcggccgacaccggggcgaaactcgacagcctc
aagaatgcccattggctggaacgccgcgccgtgctggaggcggagatcgccgagacagcc
aagggaatcctgcgcgaggcccgccgccgcgcgcgcgaaattgcgccggtcatcgacccg
ccggccgaccgcatgcgccgtttcggcgcccgcttcggcttcgatcccaccgaggggcag
cggcgcgccgtccaagcggtgctcgacgccatgcggcagggtcacccgatggaccatctg
gtctgcgccgatgtcgggtacggcaagaccgaggtggccttgcgcgcggcggcggccgtc
gcctttgccggccatcaggtggcggtgatggccccgacctccgtcctcgcccgccagcat
ctggacgtgttccgccgccgcttcgccggcttcggcgtgacggtggagccgctgaccggc
gccatgaccaaggccgaggccgaccgggtgcgcgccggactggccgacgggtcggtcgac
atcgtcatcggcacacatgcgctgctgtccaaggacgtccggttcgaccgtctcggcctg
atggtggtggatgaggaacagcgcttcggcgccgcccagaagcaggcgctgaagcagcgg
accaagggcgtccacagtctggcgctcagcgccacgccgatcccgcgcaccctgcagggc
gccctggccggcctgcgcgggctcagcatcatcgacaccccgccggcccgccgccggccg
gtgcgcaccgccgtgacaccgcgcgacccggccaccgcccgcgccgccctgctgcgcgaa
ctggggcgcggcgggcaggcattctgcgtcgctccgcgcatcgccgacctcggcgagctg
gaggcatggatccgcgaactggcgccgtcggcccgcatcgcggtcgcgcatggccggctg
ggggcggcggcgctggacgatgcggtgatgggcttcgtcgacggcgagagcgacattctg
ctggcgacgccgatcatcgaatccggcatcgacatcccgcgcgccaacacgctgctgctg
ttccgccccgacctgttcgggctgggccagttgcaccagctgcgcggccgggtcgggcgg
ggtgcggtgcagggctatgcctatctgctgaccgacccggcccacccgctggaggagcgg
gcggcccgccggctcggctcgctggaggtgatcgagagcctgggcggcggcttcgtgctg
agcatgctcgacctcgaccagcgtggggcgggcgacctgctgggcgaggaccagagcggc
catctgcgcgcggtgggaaccgaactctaccagcgcatcctggccgactccctgcggacg
ttgcgccgccagcccgatgaccgctgggacccggaggtgacggtcgcggtgccgcattgc
atcccgtccgcctacatcccagaggaggagctgcgcatcggcctgcaccgccgcatcgcc
cgcacccgcgaggcgggcgagttggacgccctgcgcgaggagatggaggaccgcttcggc
ccgctgccggacccggtggagcggctgctggccatcgccgacctgcgctgccgttgccgg
gcaatgggcgtcgcgtcgcttggctgcggcccggcgggcgtcgccgtcaccctgcggggc
gaccgcgccgcggccaaggcggcgacgctggcgaaacgctccaagggcttcctgcgcgcc
cgggacgatcggctgtccgctgcgctggaggcgccggacgccgacgggcgtctcaccaac
gcggcccgcgtgctcgactgcatcgaggcgatcgtccgcaaggcgcagcggcgaaagcgg
ggataa
DBGET
integrated database retrieval system
